Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ccdc88aQ5SNZ0 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ccdc88aQ5SNZ0 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm42986-201ENSMUST00000201618 3385 ntBASIC5.06□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm43527-201ENSMUST00000198749 3178 ntBASIC5.06□□□□□ -1.6
Ccdc88aQ5SNZ0 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm37527-201ENSMUST00000192406 3547 ntBASIC5.06□□□□□ -1.6
Ccdc88aQ5SNZ0 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC5.06□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm11698-201ENSMUST00000117948 455 ntBASIC5.06□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm11781-201ENSMUST00000118328 472 ntBASIC5.06□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm14603-201ENSMUST00000121275 448 ntBASIC5.06□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm22536-201ENSMUST00000158171 134 ntBASIC5.06□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm38270-201ENSMUST00000192721 407 ntBASIC5.06□□□□□ -1.6
Ccdc88aQ5SNZ0 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC5.06□□□□□ -1.6
Ccdc88aQ5SNZ0 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC5.06□□□□□ -1.6
Ccdc88aQ5SNZ0 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm4036-201ENSMUST00000220842 626 ntBASIC5.06□□□□□ -1.6
Ccdc88aQ5SNZ0 AL606513.1-201ENSMUST00000225369 579 ntBASIC5.06□□□□□ -1.6
Ccdc88aQ5SNZ0 AC160756.1-201ENSMUST00000227266 235 ntBASIC5.06□□□□□ -1.6
Ccdc88aQ5SNZ0 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ccdc88aQ5SNZ0 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ccdc88aQ5SNZ0 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Ccdc88aQ5SNZ0 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ccdc88aQ5SNZ0 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ccdc88aQ5SNZ0 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ccdc88aQ5SNZ0 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm23082-201ENSMUST00000157852 133 ntBASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Ighv1-28-201ENSMUST00000192987 351 ntBASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm18487-201ENSMUST00000215826 878 ntBASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm38091-201ENSMUST00000192418 3871 ntBASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm38259-201ENSMUST00000194602 3534 ntBASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm25168-201ENSMUST00000104189 132 ntBASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm13321-201ENSMUST00000117101 400 ntBASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm15783-201ENSMUST00000117521 633 ntBASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm15014-201ENSMUST00000120742 258 ntBASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm44523-201ENSMUST00000205616 417 ntBASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 CT030242.2-201ENSMUST00000221588 148 ntBASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Snora7a-201ENSMUST00000082629 140 ntBASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ccdc88aQ5SNZ0 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm45235-201ENSMUST00000208016 4465 ntBASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm37911-201ENSMUST00000193099 1545 ntBASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm5155-201ENSMUST00000072381 2841 ntBASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm42991-201ENSMUST00000196468 3837 ntBASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm5117-201ENSMUST00000178878 2553 ntBASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm45211-201ENSMUST00000206208 2650 ntBASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm14103-201ENSMUST00000119075 366 ntBASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm14282-201ENSMUST00000119484 240 ntBASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm22453-201ENSMUST00000122801 318 ntBASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm15534-201ENSMUST00000137642 562 ntBASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm23865-201ENSMUST00000157723 97 ntBASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm5876-201ENSMUST00000203735 243 ntBASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 AC131747.1-201ENSMUST00000226159 793 ntBASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc88aQ5SNZ0 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ccdc88aQ5SNZ0 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Ccdc88aQ5SNZ0 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc88aQ5SNZ0 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms