Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm4734-201ENSMUST00000200117 777 ntBASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Gm44952-201ENSMUST00000204443 433 ntBASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Gm45228-201ENSMUST00000206585 352 ntBASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 AC123064.2-201ENSMUST00000217758 193 ntBASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Gm46327-201ENSMUST00000218240 365 ntBASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 AC153870.1-201ENSMUST00000219599 560 ntBASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Gm18189-201ENSMUST00000218153 1951 ntBASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Gm28240-201ENSMUST00000187560 2053 ntBASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Gm15058-201ENSMUST00000117689 458 ntBASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Gm14854-201ENSMUST00000117758 841 ntBASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Gm11878-201ENSMUST00000117908 400 ntBASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Gm12852-201ENSMUST00000119478 719 ntBASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Gm15480-201ENSMUST00000120442 519 ntBASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Gm12317-201ENSMUST00000122307 319 ntBASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Gm24444-201ENSMUST00000157244 308 ntBASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Gm24675-201ENSMUST00000158757 259 ntBASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Gm27036-201ENSMUST00000182465 980 ntBASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Gm19086-201ENSMUST00000190772 665 ntBASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Gm43037-201ENSMUST00000196808 250 ntBASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Gm5876-201ENSMUST00000203735 243 ntBASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Gm45081-201ENSMUST00000206281 572 ntBASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 AC122301.1-201ENSMUST00000219625 507 ntBASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Upf3bQ3ULL6 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Upf3bQ3ULL6 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Upf3bQ3ULL6 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Upf3bQ3ULL6 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.69□□□□□ -1.66
Upf3bQ3ULL6 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Upf3bQ3ULL6 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.69□□□□□ -1.66
Upf3bQ3ULL6 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Upf3bQ3ULL6 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Upf3bQ3ULL6 Gm13386-201ENSMUST00000117677 124 ntBASIC4.69□□□□□ -1.66
Upf3bQ3ULL6 Gm14388-201ENSMUST00000118119 477 ntBASIC4.69□□□□□ -1.66
Upf3bQ3ULL6 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Upf3bQ3ULL6 Gm23465-201ENSMUST00000157134 262 ntBASIC4.69□□□□□ -1.66
Upf3bQ3ULL6 Gm22923-201ENSMUST00000174952 110 ntBASIC4.69□□□□□ -1.66
Upf3bQ3ULL6 Gm22917-201ENSMUST00000180116 110 ntBASIC4.69□□□□□ -1.66
Upf3bQ3ULL6 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC4.69□□□□□ -1.66
Upf3bQ3ULL6 Igkv12-47-201ENSMUST00000196961 356 ntBASIC4.69□□□□□ -1.66
Upf3bQ3ULL6 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.69□□□□□ -1.66
Upf3bQ3ULL6 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Upf3bQ3ULL6 AC174776.1-201ENSMUST00000221509 405 ntBASIC4.69□□□□□ -1.66
Upf3bQ3ULL6 AC174776.2-201ENSMUST00000222561 405 ntBASIC4.69□□□□□ -1.66
Upf3bQ3ULL6 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.69□□□□□ -1.66
Upf3bQ3ULL6 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Upf3bQ3ULL6 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms