Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Msx2Q03358 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.59□□□□□ -1.51
Msx2Q03358 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.59□□□□□ -1.52
Msx2Q03358 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.59□□□□□ -1.52
Msx2Q03358 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Msx2Q03358 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Msx2Q03358 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.59□□□□□ -1.52
Msx2Q03358 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.52
Msx2Q03358 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.52
Msx2Q03358 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.59□□□□□ -1.52
Msx2Q03358 Gm44625-201ENSMUST00000207838 1561 ntBASIC5.59□□□□□ -1.52
Msx2Q03358 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Msx2Q03358 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Msx2Q03358 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Msx2Q03358 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Msx2Q03358 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Msx2Q03358 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Msx2Q03358 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Msx2Q03358 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.58□□□□□ -1.52
Msx2Q03358 Gm36962-201ENSMUST00000192114 1761 ntBASIC5.58□□□□□ -1.52
Msx2Q03358 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
Msx2Q03358 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Msx2Q03358 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Msx2Q03358 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.58□□□□□ -1.52
Msx2Q03358 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Msx2Q03358 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Msx2Q03358 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Msx2Q03358 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Msx2Q03358 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Msx2Q03358 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Msx2Q03358 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC5.58□□□□□ -1.52
Msx2Q03358 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Msx2Q03358 Gm13379-201ENSMUST00000118053 621 ntBASIC5.58□□□□□ -1.52
Msx2Q03358 Gm11363-201ENSMUST00000121672 548 ntBASIC5.58□□□□□ -1.52
Msx2Q03358 Gm12755-201ENSMUST00000122297 282 ntBASIC5.58□□□□□ -1.52
Msx2Q03358 Defa-ps12-201ENSMUST00000122353 193 ntBASIC5.58□□□□□ -1.52
Msx2Q03358 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Msx2Q03358 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Msx2Q03358 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Msx2Q03358 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Msx2Q03358 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Msx2Q03358 Gm22242-201ENSMUST00000175224 118 ntBASIC5.58□□□□□ -1.52
Msx2Q03358 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Msx2Q03358 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Msx2Q03358 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Msx2Q03358 Gm17946-201ENSMUST00000186856 538 ntBASIC5.58□□□□□ -1.52
Msx2Q03358 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Msx2Q03358 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC5.58□□□□□ -1.52
Msx2Q03358 Gm33354-201ENSMUST00000195448 906 ntBASIC5.58□□□□□ -1.52
Msx2Q03358 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Msx2Q03358 Mir142-201ENSMUST00000198092 64 ntBASIC5.58□□□□□ -1.52
Msx2Q03358 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC5.58□□□□□ -1.52
Msx2Q03358 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC5.58□□□□□ -1.52
Msx2Q03358 Gm44163-201ENSMUST00000205140 475 ntBASIC5.58□□□□□ -1.52
Msx2Q03358 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC5.58□□□□□ -1.52
Msx2Q03358 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC5.58□□□□□ -1.52
Msx2Q03358 AC159208.1-201ENSMUST00000221403 649 ntBASIC5.58□□□□□ -1.52
Msx2Q03358 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC5.58□□□□□ -1.52
Msx2Q03358 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
Msx2Q03358 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.58□□□□□ -1.52
Msx2Q03358 AC115735.5-201ENSMUST00000228386 397 ntBASIC5.58□□□□□ -1.52
Msx2Q03358 Gm29486-201ENSMUST00000088648 372 ntBASIC5.58□□□□□ -1.52
Msx2Q03358 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Msx2Q03358 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Msx2Q03358 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Msx2Q03358 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Msx2Q03358 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Msx2Q03358 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Msx2Q03358 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Msx2Q03358 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Msx2Q03358 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Msx2Q03358 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Msx2Q03358 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Msx2Q03358 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Msx2Q03358 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Msx2Q03358 AC122769.3-201ENSMUST00000227739 3245 ntBASIC5.57□□□□□ -1.52
Msx2Q03358 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.57□□□□□ -1.52
Msx2Q03358 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Msx2Q03358 Gm6215-201ENSMUST00000119297 1386 ntBASIC5.57□□□□□ -1.52
Msx2Q03358 Gm7905-201ENSMUST00000119933 1386 ntBASIC5.57□□□□□ -1.52
Msx2Q03358 Gm6207-201ENSMUST00000120075 1386 ntBASIC5.57□□□□□ -1.52
Msx2Q03358 Gm6228-201ENSMUST00000178856 1386 ntBASIC5.57□□□□□ -1.52
Msx2Q03358 Gm6221-201ENSMUST00000180064 1386 ntBASIC5.57□□□□□ -1.52
Msx2Q03358 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Msx2Q03358 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Msx2Q03358 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Msx2Q03358 Gm22656-201ENSMUST00000104199 171 ntBASIC5.57□□□□□ -1.52
Msx2Q03358 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Msx2Q03358 Gm11256-201ENSMUST00000118109 829 ntBASIC5.57□□□□□ -1.52
Msx2Q03358 Gm14897-201ENSMUST00000118213 207 ntBASIC5.57□□□□□ -1.52
Msx2Q03358 Gm14001-201ENSMUST00000118847 247 ntBASIC5.57□□□□□ -1.52
Msx2Q03358 Gm12448-201ENSMUST00000118852 655 ntBASIC5.57□□□□□ -1.52
Msx2Q03358 Gm14901-201ENSMUST00000119001 283 ntBASIC5.57□□□□□ -1.52
Msx2Q03358 Gm11352-201ENSMUST00000119264 517 ntBASIC5.57□□□□□ -1.52
Msx2Q03358 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.57□□□□□ -1.52
Msx2Q03358 Gm14867-201ENSMUST00000120156 866 ntBASIC5.57□□□□□ -1.52
Msx2Q03358 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC5.57□□□□□ -1.52
Msx2Q03358 Gm14732-201ENSMUST00000121372 545 ntBASIC5.57□□□□□ -1.52
Msx2Q03358 Gm23888-201ENSMUST00000122690 253 ntBASIC5.57□□□□□ -1.52
Msx2Q03358 Mup-ps2-201ENSMUST00000142602 533 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms