Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NcanP55066 Gm25727-201ENSMUST00000104522 131 ntBASIC5.02□□□□□ -1.61
NcanP55066 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NcanP55066 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NcanP55066 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NcanP55066 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC5.02□□□□□ -1.61
NcanP55066 Gm15988-201ENSMUST00000118677 367 ntBASIC5.02□□□□□ -1.61
NcanP55066 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NcanP55066 Gm4910-201ENSMUST00000119605 366 ntBASIC5.02□□□□□ -1.61
NcanP55066 Gm12335-201ENSMUST00000119738 327 ntBASIC5.02□□□□□ -1.61
NcanP55066 Gm14619-201ENSMUST00000120480 168 ntBASIC5.02□□□□□ -1.61
NcanP55066 Gm23467-201ENSMUST00000157127 159 ntBASIC5.02□□□□□ -1.61
NcanP55066 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NcanP55066 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NcanP55066 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NcanP55066 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NcanP55066 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC5.02□□□□□ -1.61
NcanP55066 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NcanP55066 Gm25999-201ENSMUST00000175398 133 ntBASIC5.02□□□□□ -1.61
NcanP55066 Gm18953-201ENSMUST00000175694 300 ntBASIC5.02□□□□□ -1.61
NcanP55066 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NcanP55066 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC5.02□□□□□ -1.61
NcanP55066 Gm37719-201ENSMUST00000194615 292 ntBASIC5.02□□□□□ -1.61
NcanP55066 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC5.02□□□□□ -1.61
NcanP55066 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NcanP55066 AC160865.1-201ENSMUST00000219873 151 ntBASIC5.02□□□□□ -1.61
NcanP55066 AC129935.1-201ENSMUST00000226302 873 ntBASIC5.02□□□□□ -1.61
NcanP55066 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NcanP55066 Gm44739-201ENSMUST00000205294 1426 ntBASIC5.02□□□□□ -1.61
NcanP55066 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
NcanP55066 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.02□□□□□ -1.61
NcanP55066 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
NcanP55066 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NcanP55066 Gm43523-201ENSMUST00000197397 2878 ntBASIC5.02□□□□□ -1.61
NcanP55066 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.02□□□□□ -1.61
NcanP55066 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NcanP55066 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
NcanP55066 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
NcanP55066 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
NcanP55066 Gm22750-201ENSMUST00000102076 103 ntBASIC5.01□□□□□ -1.61
NcanP55066 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
NcanP55066 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC5.01□□□□□ -1.61
NcanP55066 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC5.01□□□□□ -1.61
NcanP55066 Gm22600-201ENSMUST00000157598 269 ntBASIC5.01□□□□□ -1.61
NcanP55066 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
NcanP55066 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NcanP55066 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NcanP55066 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC5.01□□□□□ -1.61
NcanP55066 Gm38201-201ENSMUST00000192143 387 ntBASIC5.01□□□□□ -1.61
NcanP55066 Trdv3-201ENSMUST00000198551 309 ntBASIC5.01□□□□□ -1.61
NcanP55066 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NcanP55066 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC5.01□□□□□ -1.61
NcanP55066 Gm4045-201ENSMUST00000204076 310 ntBASIC5.01□□□□□ -1.61
NcanP55066 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
NcanP55066 Gm19201-201ENSMUST00000210127 778 ntBASIC5.01□□□□□ -1.61
NcanP55066 Gm7786-201ENSMUST00000210494 436 ntBASIC5.01□□□□□ -1.61
NcanP55066 CR974429.1-201ENSMUST00000220877 827 ntBASIC5.01□□□□□ -1.61
NcanP55066 AC154828.2-201ENSMUST00000220908 1070 ntBASIC5.01□□□□□ -1.61
NcanP55066 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC5.01□□□□□ -1.61
NcanP55066 AL589696.1-201ENSMUST00000225711 330 ntBASIC5.01□□□□□ -1.61
NcanP55066 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NcanP55066 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
NcanP55066 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
NcanP55066 Snora7a-201ENSMUST00000082629 140 ntBASIC5.01□□□□□ -1.61
NcanP55066 n-R5s7-201ENSMUST00000083755 121 ntBASIC5.01□□□□□ -1.61
NcanP55066 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NcanP55066 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NcanP55066 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NcanP55066 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
NcanP55066 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
NcanP55066 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NcanP55066 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.01□□□□□ -1.61
NcanP55066 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
NcanP55066 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
NcanP55066 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NcanP55066 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NcanP55066 Gm37833-201ENSMUST00000194342 3256 ntBASIC5□□□□□ -1.61
NcanP55066 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5□□□□□ -1.61
NcanP55066 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
NcanP55066 Gm15923-201ENSMUST00000119300 1169 ntBASIC5□□□□□ -1.61
NcanP55066 Gm25432-201ENSMUST00000158284 66 ntBASIC5□□□□□ -1.61
NcanP55066 Gm24931-201ENSMUST00000158324 107 ntBASIC5□□□□□ -1.61
NcanP55066 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC5□□□□□ -1.61
NcanP55066 Gm28011-201ENSMUST00000184097 175 ntBASIC5□□□□□ -1.61
NcanP55066 Dlx6os1-204ENSMUST00000184182 146 ntBASIC5□□□□□ -1.61
NcanP55066 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5□□□□□ -1.61
NcanP55066 Gm2979-201ENSMUST00000193442 463 ntBASIC5□□□□□ -1.61
NcanP55066 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NcanP55066 Gm43828-201ENSMUST00000196890 639 ntBASIC5□□□□□ -1.61
NcanP55066 Gm42665-201ENSMUST00000202100 586 ntBASIC5□□□□□ -1.61
NcanP55066 Gm44623-201ENSMUST00000207934 434 ntBASIC5□□□□□ -1.61
NcanP55066 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC5□□□□□ -1.61
NcanP55066 Gm45789-201ENSMUST00000213038 364 ntBASIC5□□□□□ -1.61
NcanP55066 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC5□□□□□ -1.61
NcanP55066 Gm18377-201ENSMUST00000215141 607 ntBASIC5□□□□□ -1.61
NcanP55066 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC5□□□□□ -1.61
NcanP55066 Gm19134-201ENSMUST00000221203 487 ntBASIC5□□□□□ -1.61
NcanP55066 Gm34165-201ENSMUST00000222012 1174 ntBASIC5□□□□□ -1.61
NcanP55066 AV026068-237ENSMUST00000226075 572 ntBASIC5□□□□□ -1.61
NcanP55066 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms