Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm4989-201ENSMUST00000118711 749 ntBASIC6.1□□□□□ -1.43
Sox1P53783 Gm13737-201ENSMUST00000119793 232 ntBASIC6.1□□□□□ -1.43
Sox1P53783 Gm3216-201ENSMUST00000166927 486 ntBASIC6.1□□□□□ -1.43
Sox1P53783 Gm23631-201ENSMUST00000175291 123 ntBASIC6.1□□□□□ -1.43
Sox1P53783 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Sox1P53783 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Sox1P53783 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Sox1P53783 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Sox1P53783 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Sox1P53783 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Sox1P53783 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Sox1P53783 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Sox1P53783 Mir6933-201ENSMUST00000184982 81 ntBASIC6.1□□□□□ -1.43
Sox1P53783 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC6.1□□□□□ -1.43
Sox1P53783 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC6.1□□□□□ -1.43
Sox1P53783 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sox1P53783 Gm43114-201ENSMUST00000198298 343 ntBASIC6.1□□□□□ -1.43
Sox1P53783 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC6.1□□□□□ -1.43
Sox1P53783 Gm45171-201ENSMUST00000206360 736 ntBASIC6.1□□□□□ -1.43
Sox1P53783 Gm44923-201ENSMUST00000206673 85 ntBASIC6.1□□□□□ -1.43
Sox1P53783 Gm45731-201ENSMUST00000211988 1203 ntBASIC6.1□□□□□ -1.43
Sox1P53783 CR974592.1-201ENSMUST00000220422 574 ntBASIC6.1□□□□□ -1.43
Sox1P53783 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC6.1□□□□□ -1.43
Sox1P53783 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC6.1□□□□□ -1.43
Sox1P53783 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Sox1P53783 Gm9845-201ENSMUST00000056409 598 ntBASIC6.1□□□□□ -1.43
Sox1P53783 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Sox1P53783 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Sox1P53783 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC6.1□□□□□ -1.43
Sox1P53783 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sox1P53783 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sox1P53783 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Sox1P53783 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Sox1P53783 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sox1P53783 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC6.1□□□□□ -1.43
Sox1P53783 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sox1P53783 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC6.1□□□□□ -1.43
Sox1P53783 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sox1P53783 AC126549.1-201ENSMUST00000225044 3687 ntBASIC6.1□□□□□ -1.43
Sox1P53783 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Sox1P53783 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sox1P53783 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sox1P53783 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sox1P53783 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sox1P53783 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sox1P53783 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sox1P53783 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sox1P53783 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.43
Sox1P53783 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sox1P53783 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sox1P53783 Gm43961-201ENSMUST00000203289 1872 ntBASIC6.09□□□□□ -1.43
Sox1P53783 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sox1P53783 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Sox1P53783 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sox1P53783 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sox1P53783 AC124556.1-201ENSMUST00000218256 1319 ntBASIC6.09□□□□□ -1.43
Sox1P53783 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sox1P53783 Gm37864-201ENSMUST00000195308 3075 ntBASIC6.09□□□□□ -1.43
Sox1P53783 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sox1P53783 Gm37717-201ENSMUST00000192647 3027 ntBASIC6.09□□□□□ -1.43
Sox1P53783 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.43
Sox1P53783 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
Sox1P53783 Gm23431-201ENSMUST00000104006 107 ntBASIC6.09□□□□□ -1.43
Sox1P53783 Gm23485-201ENSMUST00000104181 155 ntBASIC6.09□□□□□ -1.43
Sox1P53783 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Sox1P53783 Gm13681-201ENSMUST00000117925 210 ntBASIC6.09□□□□□ -1.43
Sox1P53783 Gm14835-201ENSMUST00000119039 315 ntBASIC6.09□□□□□ -1.43
Sox1P53783 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sox1P53783 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC6.09□□□□□ -1.43
Sox1P53783 Mir1946b-201ENSMUST00000157853 133 ntBASIC6.09□□□□□ -1.43
Sox1P53783 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC6.09□□□□□ -1.43
Sox1P53783 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC6.09□□□□□ -1.43
Sox1P53783 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Sox1P53783 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Sox1P53783 Gm25873-201ENSMUST00000180317 107 ntBASIC6.09□□□□□ -1.43
Sox1P53783 Gm19029-201ENSMUST00000189923 564 ntBASIC6.09□□□□□ -1.43
Sox1P53783 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC6.09□□□□□ -1.43
Sox1P53783 Gm38291-201ENSMUST00000193671 259 ntBASIC6.09□□□□□ -1.43
Sox1P53783 Gm43406-201ENSMUST00000200356 334 ntBASIC6.09□□□□□ -1.43
Sox1P53783 Gm44142-201ENSMUST00000203358 311 ntBASIC6.09□□□□□ -1.43
Sox1P53783 Gm7948-201ENSMUST00000212607 844 ntBASIC6.09□□□□□ -1.43
Sox1P53783 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC6.09□□□□□ -1.43
Sox1P53783 Gm5917-201ENSMUST00000217638 721 ntBASIC6.09□□□□□ -1.43
Sox1P53783 Gm18247-201ENSMUST00000222937 601 ntBASIC6.09□□□□□ -1.43
Sox1P53783 AC133101.1-201ENSMUST00000226939 1199 ntBASIC6.09□□□□□ -1.43
Sox1P53783 Ear14-201ENSMUST00000049559 468 ntBASIC6.09□□□□□ -1.43
Sox1P53783 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Sox1P53783 Gm22265-201ENSMUST00000082947 116 ntBASIC6.09□□□□□ -1.43
Sox1P53783 Mir17-201ENSMUST00000083574 84 ntBASIC6.09□□□□□ -1.43
Sox1P53783 Gm25859-201ENSMUST00000083710 91 ntBASIC6.09□□□□□ -1.43
Sox1P53783 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sox1P53783 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sox1P53783 Gm15930-201ENSMUST00000156603 2037 ntBASIC6.09□□□□□ -1.43
Sox1P53783 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sox1P53783 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC6.09□□□□□ -1.43
Sox1P53783 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
Sox1P53783 Gm44678-201ENSMUST00000207828 2775 ntBASIC6.09□□□□□ -1.43
Sox1P53783 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sox1P53783 AC139758.3-201ENSMUST00000226853 2704 ntBASIC6.09□□□□□ -1.43
Sox1P53783 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms