Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
Lire1P11260 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Lire1P11260 Mir27a-201ENSMUST00000083510 87 ntBASIC4.84□□□□□ -1.63
Lire1P11260 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Lire1P11260 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
Lire1P11260 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
Lire1P11260 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Lire1P11260 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Lire1P11260 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.84□□□□□ -1.63
Lire1P11260 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Lire1P11260 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Lire1P11260 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.84□□□□□ -1.64
Lire1P11260 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lire1P11260 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Lire1P11260 Gm44250-201ENSMUST00000203092 4229 ntBASIC4.83□□□□□ -1.64
Lire1P11260 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Lire1P11260 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Lire1P11260 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Lire1P11260 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Lire1P11260 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lire1P11260 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lire1P11260 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Lire1P11260 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Lire1P11260 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lire1P11260 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Lire1P11260 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lire1P11260 Gm6754-201ENSMUST00000117124 913 ntBASIC4.83□□□□□ -1.64
Lire1P11260 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lire1P11260 Gm14890-201ENSMUST00000117660 676 ntBASIC4.83□□□□□ -1.64
Lire1P11260 Gm11774-201ENSMUST00000118601 293 ntBASIC4.83□□□□□ -1.64
Lire1P11260 Gm14874-201ENSMUST00000118995 438 ntBASIC4.83□□□□□ -1.64
Lire1P11260 Gm11909-201ENSMUST00000121424 759 ntBASIC4.83□□□□□ -1.64
Lire1P11260 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC4.83□□□□□ -1.64
Lire1P11260 Gm23513-201ENSMUST00000158181 133 ntBASIC4.83□□□□□ -1.64
Lire1P11260 Gm23546-201ENSMUST00000158211 137 ntBASIC4.83□□□□□ -1.64
Lire1P11260 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.83□□□□□ -1.64
Lire1P11260 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC4.83□□□□□ -1.64
Lire1P11260 Gm22411-201ENSMUST00000175462 126 ntBASIC4.83□□□□□ -1.64
Lire1P11260 Gm22002-201ENSMUST00000175622 125 ntBASIC4.83□□□□□ -1.64
Lire1P11260 Mir7028-201ENSMUST00000185016 64 ntBASIC4.83□□□□□ -1.64
Lire1P11260 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC4.83□□□□□ -1.64
Lire1P11260 Gm29105-201ENSMUST00000187256 450 ntBASIC4.83□□□□□ -1.64
Lire1P11260 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC4.83□□□□□ -1.64
Lire1P11260 Gm28655-201ENSMUST00000191538 692 ntBASIC4.83□□□□□ -1.64
Lire1P11260 Gm37857-201ENSMUST00000191784 1199 ntBASIC4.83□□□□□ -1.64
Lire1P11260 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC4.83□□□□□ -1.64
Lire1P11260 Gm42502-201ENSMUST00000198550 1089 ntBASIC4.83□□□□□ -1.64
Lire1P11260 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC4.83□□□□□ -1.64
Lire1P11260 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC4.83□□□□□ -1.64
Lire1P11260 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC4.83□□□□□ -1.64
Lire1P11260 Gm7045-201ENSMUST00000221466 605 ntBASIC4.83□□□□□ -1.64
Lire1P11260 AC153662.1-201ENSMUST00000222220 270 ntBASIC4.83□□□□□ -1.64
Lire1P11260 AC173481.1-201ENSMUST00000223351 270 ntBASIC4.83□□□□□ -1.64
Lire1P11260 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC4.83□□□□□ -1.64
Lire1P11260 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lire1P11260 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
Lire1P11260 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Lire1P11260 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Lire1P11260 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Lire1P11260 Gm22444-201ENSMUST00000093693 108 ntBASIC4.83□□□□□ -1.64
Lire1P11260 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
Lire1P11260 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Lire1P11260 Gm3616-201ENSMUST00000174430 2514 ntBASIC4.83□□□□□ -1.64
Lire1P11260 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Lire1P11260 Gm44235-201ENSMUST00000204312 3058 ntBASIC4.83□□□□□ -1.64
Lire1P11260 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Lire1P11260 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Lire1P11260 Gm10727-201ENSMUST00000197107 1602 ntBASIC4.83□□□□□ -1.64
Lire1P11260 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Lire1P11260 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC4.82□□□□□ -1.64
Lire1P11260 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Lire1P11260 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Lire1P11260 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Lire1P11260 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Lire1P11260 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Lire1P11260 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
Lire1P11260 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Lire1P11260 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.82□□□□□ -1.64
Lire1P11260 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Lire1P11260 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC4.82□□□□□ -1.64
Lire1P11260 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Lire1P11260 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Lire1P11260 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Lire1P11260 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
Lire1P11260 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Lire1P11260 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Lire1P11260 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Lire1P11260 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Lire1P11260 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Lire1P11260 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC4.82□□□□□ -1.64
Lire1P11260 Gm12982-201ENSMUST00000117408 190 ntBASIC4.82□□□□□ -1.64
Lire1P11260 Gm12465-201ENSMUST00000118591 300 ntBASIC4.82□□□□□ -1.64
Lire1P11260 Gm11448-201ENSMUST00000120427 450 ntBASIC4.82□□□□□ -1.64
Lire1P11260 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Lire1P11260 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Lire1P11260 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Lire1P11260 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Lire1P11260 Gm18560-201ENSMUST00000173463 1123 ntBASIC4.82□□□□□ -1.64
Lire1P11260 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Lire1P11260 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms