Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
Col1a1P11087 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.05□□□□□ -1.6
Col1a1P11087 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.05□□□□□ -1.6
Col1a1P11087 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col1a1P11087 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col1a1P11087 Gm10936-201ENSMUST00000105264 252 ntBASIC5.05□□□□□ -1.6
Col1a1P11087 Gm15885-201ENSMUST00000122114 388 ntBASIC5.05□□□□□ -1.6
Col1a1P11087 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col1a1P11087 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC5.05□□□□□ -1.6
Col1a1P11087 Gm22314-201ENSMUST00000158007 281 ntBASIC5.05□□□□□ -1.6
Col1a1P11087 Gm5974-201ENSMUST00000181607 986 ntBASIC5.05□□□□□ -1.6
Col1a1P11087 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC5.05□□□□□ -1.6
Col1a1P11087 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC5.05□□□□□ -1.6
Col1a1P11087 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC5.05□□□□□ -1.6
Col1a1P11087 Gm37073-201ENSMUST00000192469 1222 ntBASIC5.05□□□□□ -1.6
Col1a1P11087 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Col1a1P11087 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC5.05□□□□□ -1.6
Col1a1P11087 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC5.05□□□□□ -1.6
Col1a1P11087 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col1a1P11087 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col1a1P11087 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
Col1a1P11087 Gm38057-201ENSMUST00000195551 3203 ntBASIC5.05□□□□□ -1.6
Col1a1P11087 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col1a1P11087 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Col1a1P11087 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col1a1P11087 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col1a1P11087 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC5.04□□□□□ -1.6
Col1a1P11087 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col1a1P11087 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col1a1P11087 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col1a1P11087 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC5.04□□□□□ -1.6
Col1a1P11087 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC5.04□□□□□ -1.6
Col1a1P11087 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.04□□□□□ -1.6
Col1a1P11087 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col1a1P11087 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col1a1P11087 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.04□□□□□ -1.6
Col1a1P11087 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col1a1P11087 Gm12379-201ENSMUST00000119607 391 ntBASIC5.04□□□□□ -1.6
Col1a1P11087 Gm23112-201ENSMUST00000158606 125 ntBASIC5.04□□□□□ -1.6
Col1a1P11087 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col1a1P11087 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
Col1a1P11087 Gm35702-201ENSMUST00000198653 511 ntBASIC5.04□□□□□ -1.6
Col1a1P11087 Gm45226-201ENSMUST00000206602 288 ntBASIC5.04□□□□□ -1.6
Col1a1P11087 Gm7368-201ENSMUST00000213307 367 ntBASIC5.04□□□□□ -1.6
Col1a1P11087 AC131677.1-201ENSMUST00000218721 535 ntBASIC5.04□□□□□ -1.6
Col1a1P11087 Gm29774-201ENSMUST00000219270 436 ntBASIC5.04□□□□□ -1.6
Col1a1P11087 AC139750.2-201ENSMUST00000224424 386 ntBASIC5.04□□□□□ -1.6
Col1a1P11087 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col1a1P11087 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Col1a1P11087 Gm13615-201ENSMUST00000120242 1612 ntBASIC5.04□□□□□ -1.6
Col1a1P11087 Gm42842-201ENSMUST00000197736 3004 ntBASIC5.04□□□□□ -1.6
Col1a1P11087 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col1a1P11087 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Col1a1P11087 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Col1a1P11087 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col1a1P11087 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col1a1P11087 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Col1a1P11087 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col1a1P11087 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col1a1P11087 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col1a1P11087 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC5.03□□□□□ -1.6
Col1a1P11087 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col1a1P11087 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col1a1P11087 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Col1a1P11087 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col1a1P11087 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.03□□□□□ -1.6
Col1a1P11087 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col1a1P11087 Gm12067-201ENSMUST00000119755 1148 ntBASIC5.03□□□□□ -1.6
Col1a1P11087 Gm6079-201ENSMUST00000121356 404 ntBASIC5.03□□□□□ -1.6
Col1a1P11087 Gm14473-201ENSMUST00000122269 557 ntBASIC5.03□□□□□ -1.6
Col1a1P11087 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col1a1P11087 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC5.03□□□□□ -1.6
Col1a1P11087 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col1a1P11087 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC5.03□□□□□ -1.6
Col1a1P11087 Gm23499-201ENSMUST00000157736 268 ntBASIC5.03□□□□□ -1.6
Col1a1P11087 Gm24553-201ENSMUST00000158653 131 ntBASIC5.03□□□□□ -1.6
Col1a1P11087 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col1a1P11087 Gm28492-201ENSMUST00000190899 1019 ntBASIC5.03□□□□□ -1.6
Col1a1P11087 Igkv8-31-201ENSMUST00000200040 372 ntBASIC5.03□□□□□ -1.6
Col1a1P11087 Gm5995-201ENSMUST00000204107 1273 ntBASIC5.03□□□□□ -1.6
Col1a1P11087 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.03□□□□□ -1.6
Col1a1P11087 AC134577.1-201ENSMUST00000227572 295 ntBASIC5.03□□□□□ -1.6
Col1a1P11087 AC154419.1-201ENSMUST00000227627 272 ntBASIC5.03□□□□□ -1.6
Col1a1P11087 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Col1a1P11087 Gm25818-201ENSMUST00000083282 164 ntBASIC5.03□□□□□ -1.6
Col1a1P11087 Gm25821-201ENSMUST00000093657 133 ntBASIC5.03□□□□□ -1.6
Col1a1P11087 Gm37639-201ENSMUST00000191623 2785 ntBASIC5.03□□□□□ -1.6
Col1a1P11087 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col1a1P11087 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
Col1a1P11087 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.03□□□□□ -1.6
Col1a1P11087 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col1a1P11087 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col1a1P11087 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
Col1a1P11087 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
Col1a1P11087 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Col1a1P11087 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC5.02□□□□□ -1.61
Col1a1P11087 Gm12458-201ENSMUST00000119387 495 ntBASIC5.02□□□□□ -1.61
Col1a1P11087 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC5.02□□□□□ -1.61
Col1a1P11087 Gm10059-201ENSMUST00000131139 171 ntBASIC5.02□□□□□ -1.61
Col1a1P11087 Gm7241-201ENSMUST00000159853 357 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms