Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxc9P09633 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
Hoxc9P09633 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Hoxc9P09633 Gm24788-201ENSMUST00000104283 156 ntBASIC5.7□□□□□ -1.5
Hoxc9P09633 Mir1193-201ENSMUST00000116761 121 ntBASIC5.7□□□□□ -1.5
Hoxc9P09633 Gm15981-201ENSMUST00000119196 457 ntBASIC5.7□□□□□ -1.5
Hoxc9P09633 Gm12638-201ENSMUST00000119531 298 ntBASIC5.7□□□□□ -1.5
Hoxc9P09633 Gm25104-201ENSMUST00000122476 163 ntBASIC5.7□□□□□ -1.5
Hoxc9P09633 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC5.7□□□□□ -1.5
Hoxc9P09633 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC5.7□□□□□ -1.5
Hoxc9P09633 Gm10059-201ENSMUST00000131139 171 ntBASIC5.7□□□□□ -1.5
Hoxc9P09633 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxc9P09633 Gm25908-201ENSMUST00000157624 98 ntBASIC5.7□□□□□ -1.5
Hoxc9P09633 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxc9P09633 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC5.7□□□□□ -1.5
Hoxc9P09633 Gm27158-201ENSMUST00000183813 238 ntBASIC5.7□□□□□ -1.5
Hoxc9P09633 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC5.7□□□□□ -1.5
Hoxc9P09633 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC5.7□□□□□ -1.5
Hoxc9P09633 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC5.7□□□□□ -1.5
Hoxc9P09633 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxc9P09633 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC5.7□□□□□ -1.5
Hoxc9P09633 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC5.7□□□□□ -1.5
Hoxc9P09633 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxc9P09633 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC5.7□□□□□ -1.5
Hoxc9P09633 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC5.7□□□□□ -1.5
Hoxc9P09633 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC5.7□□□□□ -1.5
Hoxc9P09633 Gm44023-201ENSMUST00000203710 469 ntBASIC5.7□□□□□ -1.5
Hoxc9P09633 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Hoxc9P09633 AC154239.2-201ENSMUST00000227859 233 ntBASIC5.7□□□□□ -1.5
Hoxc9P09633 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Hoxc9P09633 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
Hoxc9P09633 Gm25818-201ENSMUST00000083282 164 ntBASIC5.7□□□□□ -1.5
Hoxc9P09633 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Hoxc9P09633 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Hoxc9P09633 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Hoxc9P09633 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Hoxc9P09633 Gm43577-201ENSMUST00000197090 3344 ntBASIC5.7□□□□□ -1.5
Hoxc9P09633 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Hoxc9P09633 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxc9P09633 Gm25169-201ENSMUST00000104190 129 ntBASIC5.69□□□□□ -1.5
Hoxc9P09633 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Hoxc9P09633 Gm5757-201ENSMUST00000117494 528 ntBASIC5.69□□□□□ -1.5
Hoxc9P09633 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxc9P09633 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxc9P09633 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxc9P09633 Gm22214-201ENSMUST00000157563 172 ntBASIC5.69□□□□□ -1.5
Hoxc9P09633 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Hoxc9P09633 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxc9P09633 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.69□□□□□ -1.5
Hoxc9P09633 Gm43655-201ENSMUST00000197367 222 ntBASIC5.69□□□□□ -1.5
Hoxc9P09633 Gm43005-201ENSMUST00000199015 648 ntBASIC5.69□□□□□ -1.5
Hoxc9P09633 Gm18891-201ENSMUST00000216734 1087 ntBASIC5.69□□□□□ -1.5
Hoxc9P09633 AC134254.4-201ENSMUST00000223086 370 ntBASIC5.69□□□□□ -1.5
Hoxc9P09633 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC5.69□□□□□ -1.5
Hoxc9P09633 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Hoxc9P09633 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Hoxc9P09633 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Hoxc9P09633 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Hoxc9P09633 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Hoxc9P09633 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Hoxc9P09633 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.69□□□□□ -1.5
Hoxc9P09633 AC169985.1-201ENSMUST00000223648 2439 ntBASIC5.69□□□□□ -1.5
Hoxc9P09633 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Hoxc9P09633 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
Hoxc9P09633 Gm29325-201ENSMUST00000190705 2528 ntBASIC5.69□□□□□ -1.5
Hoxc9P09633 Gm13961-201ENSMUST00000119282 4772 ntBASIC5.68□□□□□ -1.5
Hoxc9P09633 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Hoxc9P09633 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Hoxc9P09633 Gm18066-201ENSMUST00000210904 1774 ntBASIC5.68□□□□□ -1.5
Hoxc9P09633 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Hoxc9P09633 Gm15151-201ENSMUST00000117106 177 ntBASIC5.68□□□□□ -1.5
Hoxc9P09633 Gm13787-201ENSMUST00000120422 168 ntBASIC5.68□□□□□ -1.5
Hoxc9P09633 Gm12288-201ENSMUST00000121054 1282 ntBASIC5.68□□□□□ -1.5
Hoxc9P09633 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Hoxc9P09633 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC5.68□□□□□ -1.5
Hoxc9P09633 Gm23897-201ENSMUST00000158110 158 ntBASIC5.68□□□□□ -1.5
Hoxc9P09633 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Hoxc9P09633 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Hoxc9P09633 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Hoxc9P09633 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC5.68□□□□□ -1.5
Hoxc9P09633 Gm28492-201ENSMUST00000190899 1019 ntBASIC5.68□□□□□ -1.5
Hoxc9P09633 Gm37495-201ENSMUST00000194590 264 ntBASIC5.68□□□□□ -1.5
Hoxc9P09633 Gm43559-201ENSMUST00000198755 466 ntBASIC5.68□□□□□ -1.5
Hoxc9P09633 Gm44261-201ENSMUST00000203337 209 ntBASIC5.68□□□□□ -1.5
Hoxc9P09633 AC126554.4-201ENSMUST00000221055 409 ntBASIC5.68□□□□□ -1.5
Hoxc9P09633 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Hoxc9P09633 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Hoxc9P09633 Gm25099-201ENSMUST00000093716 116 ntBASIC5.68□□□□□ -1.5
Hoxc9P09633 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Hoxc9P09633 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Hoxc9P09633 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
Hoxc9P09633 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Hoxc9P09633 Gm38057-201ENSMUST00000195551 3203 ntBASIC5.68□□□□□ -1.5
Hoxc9P09633 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Hoxc9P09633 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Hoxc9P09633 Gm43374-201ENSMUST00000202498 2391 ntBASIC5.67□□□□□ -1.5
Hoxc9P09633 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
Hoxc9P09633 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Hoxc9P09633 Gm37268-201ENSMUST00000192254 2614 ntBASIC5.67□□□□□ -1.5
Hoxc9P09633 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms