Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC3.25□□□□□ -1.89
TcraP01849 Gm13435-201ENSMUST00000120111 1023 ntBASIC3.25□□□□□ -1.89
TcraP01849 Gm11350-201ENSMUST00000121436 870 ntBASIC3.25□□□□□ -1.89
TcraP01849 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.25□□□□□ -1.89
TcraP01849 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TcraP01849 Gm23537-201ENSMUST00000157536 330 ntBASIC3.25□□□□□ -1.89
TcraP01849 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.25□□□□□ -1.89
TcraP01849 Gm28017-201ENSMUST00000183434 126 ntBASIC3.25□□□□□ -1.89
TcraP01849 Mir6343-201ENSMUST00000183584 84 ntBASIC3.25□□□□□ -1.89
TcraP01849 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC3.25□□□□□ -1.89
TcraP01849 Gm28097-201ENSMUST00000187333 366 ntBASIC3.25□□□□□ -1.89
TcraP01849 Gm28639-201ENSMUST00000191519 481 ntBASIC3.25□□□□□ -1.89
TcraP01849 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TcraP01849 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TcraP01849 Igkv4-56-201ENSMUST00000198436 349 ntBASIC3.25□□□□□ -1.89
TcraP01849 Gm29793-201ENSMUST00000202874 460 ntBASIC3.25□□□□□ -1.89
TcraP01849 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
TcraP01849 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC3.25□□□□□ -1.89
TcraP01849 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC3.25□□□□□ -1.89
TcraP01849 AC124356.2-201ENSMUST00000221874 336 ntBASIC3.25□□□□□ -1.89
TcraP01849 AC135377.1-201ENSMUST00000223692 463 ntBASIC3.25□□□□□ -1.89
TcraP01849 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TcraP01849 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TcraP01849 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TcraP01849 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC3.25□□□□□ -1.89
TcraP01849 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TcraP01849 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TcraP01849 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
TcraP01849 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
TcraP01849 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
TcraP01849 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
TcraP01849 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
TcraP01849 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC3.24□□□□□ -1.89
TcraP01849 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TcraP01849 Gm14995-201ENSMUST00000117135 391 ntBASIC3.24□□□□□ -1.89
TcraP01849 Gm14541-201ENSMUST00000118985 157 ntBASIC3.24□□□□□ -1.89
TcraP01849 Gm14125-202ENSMUST00000120921 756 ntBASIC3.24□□□□□ -1.89
TcraP01849 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TcraP01849 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TcraP01849 Gm25433-201ENSMUST00000158283 286 ntBASIC3.24□□□□□ -1.89
TcraP01849 Gm25025-201ENSMUST00000175018 111 ntBASIC3.24□□□□□ -1.89
TcraP01849 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TcraP01849 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TcraP01849 Gm27254-201ENSMUST00000183926 517 ntBASIC3.24□□□□□ -1.89
TcraP01849 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TcraP01849 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TcraP01849 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC3.24□□□□□ -1.89
TcraP01849 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC3.24□□□□□ -1.89
TcraP01849 Gm28769-201ENSMUST00000190176 615 ntBASIC3.24□□□□□ -1.89
TcraP01849 Gm37884-201ENSMUST00000191857 818 ntBASIC3.24□□□□□ -1.89
TcraP01849 Gm37095-201ENSMUST00000195421 205 ntBASIC3.24□□□□□ -1.89
TcraP01849 Gm43491-201ENSMUST00000197133 784 ntBASIC3.24□□□□□ -1.89
TcraP01849 Igkv3-8-201ENSMUST00000197635 339 ntBASIC3.24□□□□□ -1.89
TcraP01849 Gm43768-201ENSMUST00000198380 1258 ntBASIC3.24□□□□□ -1.89
TcraP01849 Gm42526-201ENSMUST00000198956 393 ntBASIC3.24□□□□□ -1.89
TcraP01849 Gm43841-201ENSMUST00000199491 586 ntBASIC3.24□□□□□ -1.89
TcraP01849 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC3.24□□□□□ -1.89
TcraP01849 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC3.24□□□□□ -1.89
TcraP01849 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC3.24□□□□□ -1.89
TcraP01849 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TcraP01849 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.24□□□□□ -1.89
TcraP01849 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
TcraP01849 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC3.24□□□□□ -1.89
TcraP01849 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TcraP01849 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TcraP01849 Gm45733-201ENSMUST00000212988 437 ntBASIC3.24□□□□□ -1.89
TcraP01849 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC3.24□□□□□ -1.89
TcraP01849 Gm9269-201ENSMUST00000221661 578 ntBASIC3.24□□□□□ -1.89
TcraP01849 AC132237.2-201ENSMUST00000221702 1209 ntBASIC3.24□□□□□ -1.89
TcraP01849 CU024892.1-201ENSMUST00000224869 515 ntBASIC3.24□□□□□ -1.89
TcraP01849 AC154806.4-201ENSMUST00000227406 439 ntBASIC3.24□□□□□ -1.89
TcraP01849 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TcraP01849 Gm23300-201ENSMUST00000082712 125 ntBASIC3.24□□□□□ -1.89
TcraP01849 Mir31-201ENSMUST00000083474 106 ntBASIC3.24□□□□□ -1.89
TcraP01849 Gm25187-201ENSMUST00000083906 133 ntBASIC3.24□□□□□ -1.89
TcraP01849 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.24□□□□□ -1.89
TcraP01849 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TcraP01849 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TcraP01849 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.24□□□□□ -1.89
TcraP01849 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TcraP01849 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC3.24□□□□□ -1.89
TcraP01849 Gm13310-201ENSMUST00000120962 1381 ntBASIC3.24□□□□□ -1.89
TcraP01849 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TcraP01849 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TcraP01849 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
TcraP01849 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.23□□□□□ -1.89
TcraP01849 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
TcraP01849 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC3.23□□□□□ -1.89
TcraP01849 Gm14304-201ENSMUST00000117272 446 ntBASIC3.23□□□□□ -1.89
TcraP01849 Gm13771-201ENSMUST00000117988 238 ntBASIC3.23□□□□□ -1.89
TcraP01849 Gm13314-201ENSMUST00000118742 335 ntBASIC3.23□□□□□ -1.89
TcraP01849 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC3.23□□□□□ -1.89
TcraP01849 Gm1866-201ENSMUST00000120701 477 ntBASIC3.23□□□□□ -1.89
TcraP01849 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TcraP01849 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TcraP01849 Gm22819-201ENSMUST00000157445 303 ntBASIC3.23□□□□□ -1.89
TcraP01849 Gm16107-201ENSMUST00000162523 862 ntBASIC3.23□□□□□ -1.89
TcraP01849 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
TcraP01849 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC3.23□□□□□ -1.89
TcraP01849 Gm8221-201ENSMUST00000178052 564 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms