Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm11692-201ENSMUST00000122121 902 ntBASIC3.61□□□□□ -1.83
Col6a4A2AX52 Gm23098-201ENSMUST00000157552 299 ntBASIC3.61□□□□□ -1.83
Col6a4A2AX52 Gm5974-201ENSMUST00000181607 986 ntBASIC3.61□□□□□ -1.83
Col6a4A2AX52 Gm29408-201ENSMUST00000187536 216 ntBASIC3.61□□□□□ -1.83
Col6a4A2AX52 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Gm38061-201ENSMUST00000192490 365 ntBASIC3.61□□□□□ -1.83
Col6a4A2AX52 Gm43039-201ENSMUST00000202883 963 ntBASIC3.61□□□□□ -1.83
Col6a4A2AX52 Gm18537-201ENSMUST00000205709 989 ntBASIC3.61□□□□□ -1.83
Col6a4A2AX52 Gm45553-201ENSMUST00000209929 507 ntBASIC3.61□□□□□ -1.83
Col6a4A2AX52 AC153852.1-201ENSMUST00000217881 567 ntBASIC3.61□□□□□ -1.83
Col6a4A2AX52 AC156803.1-201ENSMUST00000224407 820 ntBASIC3.61□□□□□ -1.83
Col6a4A2AX52 AL606513.1-201ENSMUST00000225369 579 ntBASIC3.61□□□□□ -1.83
Col6a4A2AX52 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a4A2AX52 AC115970.1-201ENSMUST00000218910 1758 ntBASIC3.61□□□□□ -1.83
Col6a4A2AX52 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC3.61□□□□□ -1.83
Col6a4A2AX52 Gm11829-201ENSMUST00000121003 282 ntBASIC3.61□□□□□ -1.83
Col6a4A2AX52 Gm12885-201ENSMUST00000122246 328 ntBASIC3.61□□□□□ -1.83
Col6a4A2AX52 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Gm9560-201ENSMUST00000205012 1201 ntBASIC3.61□□□□□ -1.83
Col6a4A2AX52 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Gm43361-201ENSMUST00000196562 4690 ntBASIC3.61□□□□□ -1.83
Col6a4A2AX52 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Gm38263-201ENSMUST00000195879 3059 ntBASIC3.61□□□□□ -1.83
Col6a4A2AX52 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a4A2AX52 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a4A2AX52 AC174797.3-203ENSMUST00000225749 2078 ntBASIC3.61□□□□□ -1.83
Col6a4A2AX52 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
Col6a4A2AX52 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Col6a4A2AX52 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col6a4A2AX52 Gm7219-201ENSMUST00000119619 297 ntBASIC3.6□□□□□ -1.83
Col6a4A2AX52 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col6a4A2AX52 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col6a4A2AX52 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col6a4A2AX52 Mir6996-201ENSMUST00000183922 61 ntBASIC3.6□□□□□ -1.83
Col6a4A2AX52 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC3.6□□□□□ -1.83
Col6a4A2AX52 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC3.6□□□□□ -1.83
Col6a4A2AX52 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC3.6□□□□□ -1.83
Col6a4A2AX52 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC3.6□□□□□ -1.83
Col6a4A2AX52 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col6a4A2AX52 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.6□□□□□ -1.83
Col6a4A2AX52 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.6□□□□□ -1.83
Col6a4A2AX52 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Col6a4A2AX52 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC3.6□□□□□ -1.83
Col6a4A2AX52 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Col6a4A2AX52 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col6a4A2AX52 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC3.6□□□□□ -1.83
Col6a4A2AX52 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col6a4A2AX52 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Col6a4A2AX52 Gm42478-201ENSMUST00000199252 1467 ntBASIC3.6□□□□□ -1.83
Col6a4A2AX52 Gm10936-201ENSMUST00000105264 252 ntBASIC3.6□□□□□ -1.83
Col6a4A2AX52 Gm13195-201ENSMUST00000117229 261 ntBASIC3.6□□□□□ -1.83
Col6a4A2AX52 Gm12062-201ENSMUST00000117533 259 ntBASIC3.6□□□□□ -1.83
Col6a4A2AX52 Gm13311-201ENSMUST00000117863 379 ntBASIC3.6□□□□□ -1.83
Col6a4A2AX52 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC3.6□□□□□ -1.83
Col6a4A2AX52 Gm37239-201ENSMUST00000193510 141 ntBASIC3.6□□□□□ -1.83
Col6a4A2AX52 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col6a4A2AX52 Gm17811-201ENSMUST00000206193 387 ntBASIC3.6□□□□□ -1.83
Col6a4A2AX52 Gm4501-201ENSMUST00000207330 551 ntBASIC3.6□□□□□ -1.83
Col6a4A2AX52 Gm4558-201ENSMUST00000207886 521 ntBASIC3.6□□□□□ -1.83
Col6a4A2AX52 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC3.6□□□□□ -1.83
Col6a4A2AX52 Gm8288-201ENSMUST00000223406 593 ntBASIC3.6□□□□□ -1.83
Col6a4A2AX52 AC154576.1-201ENSMUST00000225864 563 ntBASIC3.6□□□□□ -1.83
Col6a4A2AX52 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Col6a4A2AX52 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col6a4A2AX52 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col6a4A2AX52 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
Col6a4A2AX52 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC3.59□□□□□ -1.83
Col6a4A2AX52 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Col6a4A2AX52 Gm45160-201ENSMUST00000207112 3099 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms