Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm37050-201ENSMUST00000193464 466 ntBASIC4.45□□□□□ -1.7
Scn1aA2APX8 Gm42428-201ENSMUST00000198677 302 ntBASIC4.45□□□□□ -1.7
Scn1aA2APX8 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Scn1aA2APX8 Gm45032-201ENSMUST00000205375 520 ntBASIC4.45□□□□□ -1.7
Scn1aA2APX8 Gm44946-201ENSMUST00000208425 572 ntBASIC4.45□□□□□ -1.7
Scn1aA2APX8 AC153954.2-201ENSMUST00000213811 287 ntBASIC4.45□□□□□ -1.7
Scn1aA2APX8 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Scn1aA2APX8 Mir412-201ENSMUST00000083636 80 ntBASIC4.45□□□□□ -1.7
Scn1aA2APX8 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Scn1aA2APX8 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Scn1aA2APX8 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.45□□□□□ -1.7
Scn1aA2APX8 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.45□□□□□ -1.7
Scn1aA2APX8 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Scn1aA2APX8 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC4.45□□□□□ -1.7
Scn1aA2APX8 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.45□□□□□ -1.7
Scn1aA2APX8 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
Scn1aA2APX8 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.45□□□□□ -1.7
Scn1aA2APX8 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
Scn1aA2APX8 Gm15151-201ENSMUST00000117106 177 ntBASIC4.45□□□□□ -1.7
Scn1aA2APX8 Gm13268-201ENSMUST00000117485 433 ntBASIC4.45□□□□□ -1.7
Scn1aA2APX8 Gm13000-201ENSMUST00000120937 496 ntBASIC4.45□□□□□ -1.7
Scn1aA2APX8 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Scn1aA2APX8 Gm4487-201ENSMUST00000150617 442 ntBASIC4.45□□□□□ -1.7
Scn1aA2APX8 Gm25999-201ENSMUST00000175398 133 ntBASIC4.45□□□□□ -1.7
Scn1aA2APX8 Gm18303-201ENSMUST00000190055 1176 ntBASIC4.45□□□□□ -1.7
Scn1aA2APX8 Gm43044-201ENSMUST00000198091 379 ntBASIC4.45□□□□□ -1.7
Scn1aA2APX8 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Scn1aA2APX8 AC122035.2-201ENSMUST00000228698 462 ntBASIC4.45□□□□□ -1.7
Scn1aA2APX8 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Scn1aA2APX8 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Scn1aA2APX8 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Scn1aA2APX8 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.44□□□□□ -1.7
Scn1aA2APX8 Gm12638-201ENSMUST00000119531 298 ntBASIC4.44□□□□□ -1.7
Scn1aA2APX8 Gm14473-201ENSMUST00000122269 557 ntBASIC4.44□□□□□ -1.7
Scn1aA2APX8 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Scn1aA2APX8 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Scn1aA2APX8 Gm26607-201ENSMUST00000180661 867 ntBASIC4.44□□□□□ -1.7
Scn1aA2APX8 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC4.44□□□□□ -1.7
Scn1aA2APX8 Gm29097-201ENSMUST00000190273 422 ntBASIC4.44□□□□□ -1.7
Scn1aA2APX8 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC4.44□□□□□ -1.7
Scn1aA2APX8 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.44□□□□□ -1.7
Scn1aA2APX8 Gm17887-201ENSMUST00000200194 547 ntBASIC4.44□□□□□ -1.7
Scn1aA2APX8 Gm8132-201ENSMUST00000204938 640 ntBASIC4.44□□□□□ -1.7
Scn1aA2APX8 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.44□□□□□ -1.7
Scn1aA2APX8 Gm19786-201ENSMUST00000222589 580 ntBASIC4.44□□□□□ -1.7
Scn1aA2APX8 AV026068-220ENSMUST00000224153 1147 ntBASIC4.44□□□□□ -1.7
Scn1aA2APX8 AV026068-224ENSMUST00000224827 928 ntBASIC4.44□□□□□ -1.7
Scn1aA2APX8 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Scn1aA2APX8 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC4.44□□□□□ -1.7
Scn1aA2APX8 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Scn1aA2APX8 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.44□□□□□ -1.7
Scn1aA2APX8 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Scn1aA2APX8 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC4.44□□□□□ -1.7
Scn1aA2APX8 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
Scn1aA2APX8 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Scn1aA2APX8 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC4.43□□□□□ -1.7
Scn1aA2APX8 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Scn1aA2APX8 Gm22758-201ENSMUST00000102275 96 ntBASIC4.43□□□□□ -1.7
Scn1aA2APX8 Gm15141-201ENSMUST00000121860 729 ntBASIC4.43□□□□□ -1.7
Scn1aA2APX8 Gm16134-201ENSMUST00000161714 336 ntBASIC4.43□□□□□ -1.7
Scn1aA2APX8 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC4.43□□□□□ -1.7
Scn1aA2APX8 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC4.43□□□□□ -1.7
Scn1aA2APX8 Gm7449-201ENSMUST00000194393 663 ntBASIC4.43□□□□□ -1.7
Scn1aA2APX8 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.43□□□□□ -1.7
Scn1aA2APX8 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.43□□□□□ -1.7
Scn1aA2APX8 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Scn1aA2APX8 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Scn1aA2APX8 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Scn1aA2APX8 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.43□□□□□ -1.7
Scn1aA2APX8 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Scn1aA2APX8 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Scn1aA2APX8 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Scn1aA2APX8 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Scn1aA2APX8 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Scn1aA2APX8 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Scn1aA2APX8 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Scn1aA2APX8 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Scn1aA2APX8 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
Scn1aA2APX8 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Scn1aA2APX8 Gm43024-201ENSMUST00000196770 4352 ntBASIC4.43□□□□□ -1.7
Scn1aA2APX8 Gm14172-201ENSMUST00000118255 644 ntBASIC4.43□□□□□ -1.7
Scn1aA2APX8 Gm7363-201ENSMUST00000119883 399 ntBASIC4.43□□□□□ -1.7
Scn1aA2APX8 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC4.43□□□□□ -1.7
Scn1aA2APX8 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC4.43□□□□□ -1.7
Scn1aA2APX8 Gm23554-201ENSMUST00000157818 110 ntBASIC4.43□□□□□ -1.7
Scn1aA2APX8 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Scn1aA2APX8 Mir6975-201ENSMUST00000184879 61 ntBASIC4.43□□□□□ -1.7
Scn1aA2APX8 Gm43855-201ENSMUST00000197462 507 ntBASIC4.43□□□□□ -1.7
Scn1aA2APX8 Gm43315-201ENSMUST00000198120 313 ntBASIC4.43□□□□□ -1.7
Scn1aA2APX8 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Scn1aA2APX8 Gm45608-201ENSMUST00000210948 389 ntBASIC4.43□□□□□ -1.7
Scn1aA2APX8 CT009765.2-201ENSMUST00000221331 392 ntBASIC4.43□□□□□ -1.7
Scn1aA2APX8 AC122448.1-201ENSMUST00000226317 772 ntBASIC4.43□□□□□ -1.7
Scn1aA2APX8 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Scn1aA2APX8 Gm26165-201ENSMUST00000083791 138 ntBASIC4.43□□□□□ -1.7
Scn1aA2APX8 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Scn1aA2APX8 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Scn1aA2APX8 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Scn1aA2APX8 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Scn1aA2APX8 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms