Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Clrn1Q8K445 CT025552.2-201ENSMUST00000225497 317 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 AC117202.3-201ENSMUST00000228532 310 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 AC151907.1-201ENSMUST00000228812 412 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Snora44-201ENSMUST00000082670 129 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm26108-201ENSMUST00000083973 191 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Clrn1Q8K445 AC124516.1-201ENSMUST00000221845 3544 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Clrn1Q8K445 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.57
Clrn1Q8K445 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.57
Clrn1Q8K445 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.57
Clrn1Q8K445 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.57
Clrn1Q8K445 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Clrn1Q8K445 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.21□□□□□ -1.57
Clrn1Q8K445 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.21□□□□□ -1.57
Clrn1Q8K445 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Clrn1Q8K445 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Clrn1Q8K445 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
Clrn1Q8K445 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
Clrn1Q8K445 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
Clrn1Q8K445 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Clrn1Q8K445 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Clrn1Q8K445 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Clrn1Q8K445 Gm14785-201ENSMUST00000120185 539 ntBASIC5.21□□□□□ -1.58
Clrn1Q8K445 Gm6587-201ENSMUST00000120219 613 ntBASIC5.21□□□□□ -1.58
Clrn1Q8K445 Gm7973-201ENSMUST00000122107 488 ntBASIC5.21□□□□□ -1.58
Clrn1Q8K445 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Clrn1Q8K445 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Clrn1Q8K445 Gm16557-201ENSMUST00000159182 191 ntBASIC5.21□□□□□ -1.58
Clrn1Q8K445 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.58
Clrn1Q8K445 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC5.21□□□□□ -1.58
Clrn1Q8K445 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.21□□□□□ -1.58
Clrn1Q8K445 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.21□□□□□ -1.58
Clrn1Q8K445 Gm27855-201ENSMUST00000184122 128 ntBASIC5.21□□□□□ -1.58
Clrn1Q8K445 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC5.21□□□□□ -1.58
Clrn1Q8K445 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC5.21□□□□□ -1.58
Clrn1Q8K445 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC5.21□□□□□ -1.58
Clrn1Q8K445 Gm33973-201ENSMUST00000195148 534 ntBASIC5.21□□□□□ -1.58
Clrn1Q8K445 Gm42805-201ENSMUST00000196158 276 ntBASIC5.21□□□□□ -1.58
Clrn1Q8K445 Gm18702-201ENSMUST00000196923 588 ntBASIC5.21□□□□□ -1.58
Clrn1Q8K445 n-TStga1-201ENSMUST00000199903 109 ntBASIC5.21□□□□□ -1.58
Clrn1Q8K445 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC5.21□□□□□ -1.58
Clrn1Q8K445 Gm44673-201ENSMUST00000205692 996 ntBASIC5.21□□□□□ -1.58
Clrn1Q8K445 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.21□□□□□ -1.58
Clrn1Q8K445 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Clrn1Q8K445 Gm4032-201ENSMUST00000210886 487 ntBASIC5.21□□□□□ -1.58
Clrn1Q8K445 Gm8189-203ENSMUST00000211159 1225 ntBASIC5.21□□□□□ -1.58
Clrn1Q8K445 AC134334.1-201ENSMUST00000214277 255 ntBASIC5.21□□□□□ -1.58
Clrn1Q8K445 Gm19936-201ENSMUST00000216414 838 ntBASIC5.21□□□□□ -1.58
Clrn1Q8K445 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Clrn1Q8K445 AC116589.1-201ENSMUST00000220634 327 ntBASIC5.21□□□□□ -1.58
Clrn1Q8K445 AC122465.3-201ENSMUST00000221644 355 ntBASIC5.21□□□□□ -1.58
Clrn1Q8K445 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC5.21□□□□□ -1.58
Clrn1Q8K445 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Clrn1Q8K445 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.21□□□□□ -1.58
Clrn1Q8K445 AC160999.1-201ENSMUST00000225675 810 ntBASIC5.21□□□□□ -1.58
Clrn1Q8K445 AC131747.1-201ENSMUST00000226159 793 ntBASIC5.21□□□□□ -1.58
Clrn1Q8K445 AC154532.2-201ENSMUST00000228947 598 ntBASIC5.21□□□□□ -1.58
Clrn1Q8K445 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC5.21□□□□□ -1.58
Clrn1Q8K445 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Clrn1Q8K445 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.21□□□□□ -1.58
Clrn1Q8K445 Gm23097-201ENSMUST00000083448 105 ntBASIC5.21□□□□□ -1.58
Clrn1Q8K445 Mir412-201ENSMUST00000083636 80 ntBASIC5.21□□□□□ -1.58
Clrn1Q8K445 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Clrn1Q8K445 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Clrn1Q8K445 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.58
Clrn1Q8K445 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Clrn1Q8K445 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Clrn1Q8K445 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Clrn1Q8K445 Gm14324-201ENSMUST00000121358 3051 ntBASIC5.21□□□□□ -1.58
Clrn1Q8K445 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Clrn1Q8K445 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Clrn1Q8K445 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Clrn1Q8K445 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Clrn1Q8K445 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Clrn1Q8K445 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Clrn1Q8K445 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Clrn1Q8K445 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Clrn1Q8K445 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Clrn1Q8K445 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Clrn1Q8K445 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Clrn1Q8K445 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.2□□□□□ -1.58
Clrn1Q8K445 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms