Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Syne4Q8CII8 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Syne4Q8CII8 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Syne4Q8CII8 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC5.6□□□□□ -1.51
Syne4Q8CII8 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.6□□□□□ -1.51
Syne4Q8CII8 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Syne4Q8CII8 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Syne4Q8CII8 Gm37407-201ENSMUST00000194793 1316 ntBASIC5.6□□□□□ -1.51
Syne4Q8CII8 Gm23594-201ENSMUST00000104307 134 ntBASIC5.6□□□□□ -1.51
Syne4Q8CII8 Gm11914-201ENSMUST00000117094 507 ntBASIC5.6□□□□□ -1.51
Syne4Q8CII8 Gm11911-201ENSMUST00000117938 1023 ntBASIC5.6□□□□□ -1.51
Syne4Q8CII8 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.6□□□□□ -1.51
Syne4Q8CII8 Gm22343-201ENSMUST00000122648 286 ntBASIC5.6□□□□□ -1.51
Syne4Q8CII8 Gm24905-201ENSMUST00000158129 104 ntBASIC5.6□□□□□ -1.51
Syne4Q8CII8 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC5.6□□□□□ -1.51
Syne4Q8CII8 Gm27976-201ENSMUST00000183635 162 ntBASIC5.6□□□□□ -1.51
Syne4Q8CII8 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Syne4Q8CII8 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC5.6□□□□□ -1.51
Syne4Q8CII8 Gm7299-201ENSMUST00000194441 581 ntBASIC5.6□□□□□ -1.51
Syne4Q8CII8 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.6□□□□□ -1.51
Syne4Q8CII8 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC5.6□□□□□ -1.51
Syne4Q8CII8 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.6□□□□□ -1.51
Syne4Q8CII8 Gm8209-201ENSMUST00000206386 553 ntBASIC5.6□□□□□ -1.51
Syne4Q8CII8 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC5.6□□□□□ -1.51
Syne4Q8CII8 Gm45910-201ENSMUST00000212493 1003 ntBASIC5.6□□□□□ -1.51
Syne4Q8CII8 Gm30738-201ENSMUST00000221346 502 ntBASIC5.6□□□□□ -1.51
Syne4Q8CII8 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC5.6□□□□□ -1.51
Syne4Q8CII8 Gm5185-201ENSMUST00000080271 619 ntBASIC5.6□□□□□ -1.51
Syne4Q8CII8 Snord22-201ENSMUST00000083153 126 ntBASIC5.6□□□□□ -1.51
Syne4Q8CII8 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Syne4Q8CII8 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Syne4Q8CII8 Gm9077-201ENSMUST00000210657 2298 ntBASIC5.6□□□□□ -1.51
Syne4Q8CII8 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.6□□□□□ -1.51
Syne4Q8CII8 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Syne4Q8CII8 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Syne4Q8CII8 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Syne4Q8CII8 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Syne4Q8CII8 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Syne4Q8CII8 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Syne4Q8CII8 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Syne4Q8CII8 Gm44739-201ENSMUST00000205294 1426 ntBASIC5.59□□□□□ -1.51
Syne4Q8CII8 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC5.59□□□□□ -1.51
Syne4Q8CII8 Gm7269-201ENSMUST00000210819 1373 ntBASIC5.59□□□□□ -1.51
Syne4Q8CII8 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Syne4Q8CII8 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Syne4Q8CII8 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Syne4Q8CII8 Gm8734-201ENSMUST00000211669 1312 ntBASIC5.59□□□□□ -1.51
Syne4Q8CII8 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.59□□□□□ -1.51
Syne4Q8CII8 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC5.59□□□□□ -1.51
Syne4Q8CII8 Defa-ps1-201ENSMUST00000119062 282 ntBASIC5.59□□□□□ -1.51
Syne4Q8CII8 Gm12881-201ENSMUST00000121191 203 ntBASIC5.59□□□□□ -1.51
Syne4Q8CII8 Gm14253-201ENSMUST00000122112 639 ntBASIC5.59□□□□□ -1.51
Syne4Q8CII8 Defa-ps6-201ENSMUST00000122172 282 ntBASIC5.59□□□□□ -1.51
Syne4Q8CII8 Gm23465-201ENSMUST00000157134 262 ntBASIC5.59□□□□□ -1.51
Syne4Q8CII8 Mir6414-201ENSMUST00000183685 82 ntBASIC5.59□□□□□ -1.51
Syne4Q8CII8 Mir3620-201ENSMUST00000184710 61 ntBASIC5.59□□□□□ -1.51
Syne4Q8CII8 Gm27414-201ENSMUST00000185033 381 ntBASIC5.59□□□□□ -1.51
Syne4Q8CII8 Gm9569-201ENSMUST00000187492 787 ntBASIC5.59□□□□□ -1.51
Syne4Q8CII8 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC5.59□□□□□ -1.51
Syne4Q8CII8 Mir142-201ENSMUST00000198092 64 ntBASIC5.59□□□□□ -1.51
Syne4Q8CII8 Gm45007-201ENSMUST00000206237 366 ntBASIC5.59□□□□□ -1.51
Syne4Q8CII8 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC5.59□□□□□ -1.51
Syne4Q8CII8 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Syne4Q8CII8 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.59□□□□□ -1.51
Syne4Q8CII8 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Syne4Q8CII8 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC5.59□□□□□ -1.51
Syne4Q8CII8 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Syne4Q8CII8 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Syne4Q8CII8 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Syne4Q8CII8 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Syne4Q8CII8 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Syne4Q8CII8 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.59□□□□□ -1.51
Syne4Q8CII8 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Syne4Q8CII8 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Syne4Q8CII8 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Syne4Q8CII8 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.59□□□□□ -1.51
Syne4Q8CII8 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.59□□□□□ -1.51
Syne4Q8CII8 Gm44288-201ENSMUST00000205061 2795 ntBASIC5.59□□□□□ -1.52
Syne4Q8CII8 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Syne4Q8CII8 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.59□□□□□ -1.52
Syne4Q8CII8 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Syne4Q8CII8 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Syne4Q8CII8 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.59□□□□□ -1.52
Syne4Q8CII8 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Syne4Q8CII8 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.59□□□□□ -1.52
Syne4Q8CII8 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.59□□□□□ -1.52
Syne4Q8CII8 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.59□□□□□ -1.52
Syne4Q8CII8 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Syne4Q8CII8 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Syne4Q8CII8 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Syne4Q8CII8 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne4Q8CII8 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.58□□□□□ -1.52
Syne4Q8CII8 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC5.58□□□□□ -1.52
Syne4Q8CII8 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne4Q8CII8 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Syne4Q8CII8 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Syne4Q8CII8 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne4Q8CII8 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne4Q8CII8 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
Syne4Q8CII8 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms