Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm28546-201ENSMUST00000188221 615 ntBASIC7.79□□□□□ -1.16
Trim35Q8C006 Gm19901-201ENSMUST00000192191 495 ntBASIC7.79□□□□□ -1.16
Trim35Q8C006 Mir1897-202ENSMUST00000198006 79 ntBASIC7.79□□□□□ -1.16
Trim35Q8C006 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC7.79□□□□□ -1.16
Trim35Q8C006 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC7.79□□□□□ -1.16
Trim35Q8C006 AC108416.2-201ENSMUST00000226792 367 ntBASIC7.79□□□□□ -1.16
Trim35Q8C006 Ear-ps9-202ENSMUST00000226796 245 ntBASIC7.79□□□□□ -1.16
Trim35Q8C006 Gpihbp1-201ENSMUST00000023243 825 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim35Q8C006 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC7.79□□□□□ -1.16
Trim35Q8C006 Gm10805-201ENSMUST00000099710 399 ntBASIC7.79□□□□□ -1.16
Trim35Q8C006 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim35Q8C006 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim35Q8C006 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Trim35Q8C006 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Trim35Q8C006 Extl2-202ENSMUST00000106501 2887 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim35Q8C006 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim35Q8C006 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim35Q8C006 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim35Q8C006 Smok2b-202ENSMUST00000162940 2306 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Trim35Q8C006 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim35Q8C006 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC7.79□□□□□ -1.16
Trim35Q8C006 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim35Q8C006 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim35Q8C006 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
Trim35Q8C006 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim35Q8C006 Gm44801-201ENSMUST00000207644 2060 ntBASIC7.79□□□□□ -1.16
Trim35Q8C006 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Trim35Q8C006 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
Trim35Q8C006 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Trim35Q8C006 Gm37423-201ENSMUST00000194246 3342 ntBASIC7.78□□□□□ -1.16
Trim35Q8C006 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim35Q8C006 AC162467.2-201ENSMUST00000219397 2571 ntBASIC7.78□□□□□ -1.16
Trim35Q8C006 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim35Q8C006 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim35Q8C006 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim35Q8C006 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim35Q8C006 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Trim35Q8C006 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim35Q8C006 Olfr1198-202ENSMUST00000215179 3145 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Trim35Q8C006 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim35Q8C006 Gm12838-201ENSMUST00000116278 325 ntBASIC7.78□□□□□ -1.16
Trim35Q8C006 Gm14519-201ENSMUST00000118490 312 ntBASIC7.78□□□□□ -1.16
Trim35Q8C006 Gm11447-201ENSMUST00000118983 858 ntBASIC7.78□□□□□ -1.16
Trim35Q8C006 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim35Q8C006 Gm13901-201ENSMUST00000137252 468 ntBASIC7.78□□□□□ -1.16
Trim35Q8C006 Gm25392-201ENSMUST00000157335 297 ntBASIC7.78□□□□□ -1.16
Trim35Q8C006 Gm24537-201ENSMUST00000157950 102 ntBASIC7.78□□□□□ -1.16
Trim35Q8C006 Gm7393-201ENSMUST00000172650 739 ntBASIC7.78□□□□□ -1.16
Trim35Q8C006 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC7.78□□□□□ -1.16
Trim35Q8C006 Mir6540-201ENSMUST00000184886 108 ntBASIC7.78□□□□□ -1.16
Trim35Q8C006 Gm2950-201ENSMUST00000185530 520 ntBASIC7.78□□□□□ -1.16
Trim35Q8C006 Gm29126-201ENSMUST00000188686 151 ntBASIC7.78□□□□□ -1.16
Trim35Q8C006 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC7.78□□□□□ -1.16
Trim35Q8C006 AC165106.1-201ENSMUST00000227580 408 ntBASIC7.78□□□□□ -1.16
Trim35Q8C006 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim35Q8C006 Gm43880-201ENSMUST00000203635 2162 ntBASIC7.78□□□□□ -1.16
Trim35Q8C006 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim35Q8C006 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC7.78□□□□□ -1.16
Trim35Q8C006 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim35Q8C006 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim35Q8C006 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Trim35Q8C006 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim35Q8C006 Entpd5-205ENSMUST00000120942 4881 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim35Q8C006 Gm43537-201ENSMUST00000199064 3110 ntBASIC7.78□□□□□ -1.16
Trim35Q8C006 Zfp939-201ENSMUST00000061201 2131 ntBASIC7.78□□□□□ -1.16
Trim35Q8C006 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Trim35Q8C006 Gm42514-201ENSMUST00000196636 1832 ntBASIC7.78□□□□□ -1.16
Trim35Q8C006 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Trim35Q8C006 Gm21152-201ENSMUST00000190271 3483 ntBASIC7.77□□□□□ -1.16
Trim35Q8C006 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Trim35Q8C006 Gm2065-201ENSMUST00000194697 2757 ntBASIC7.77□□□□□ -1.16
Trim35Q8C006 Gm26629-201ENSMUST00000180848 2276 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim35Q8C006 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Trim35Q8C006 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim35Q8C006 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC7.77□□□□□ -1.17
Trim35Q8C006 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim35Q8C006 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim35Q8C006 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim35Q8C006 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim35Q8C006 Gm26135-201ENSMUST00000101993 72 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Trim35Q8C006 Gm26421-201ENSMUST00000104279 132 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 Gm26014-201ENSMUST00000104405 132 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 Gm24071-201ENSMUST00000104520 132 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 Gm17170-201ENSMUST00000112785 316 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 Gm12779-201ENSMUST00000121496 143 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 Gm15079-201ENSMUST00000121943 216 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC7.77□□□□□ -1.17
Trim35Q8C006 Gm24994-201ENSMUST00000157414 121 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 Gm25889-201ENSMUST00000157775 107 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Trim35Q8C006 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Trim35Q8C006 Ppp1r9a-204ENSMUST00000168998 2966 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim35Q8C006 Gm20450-201ENSMUST00000173652 147 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 Snord50b-201ENSMUST00000178497 72 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 Gm22450-201ENSMUST00000179641 107 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 Gm26701-201ENSMUST00000181571 234 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 Gm28234-201ENSMUST00000185657 615 ntBASIC7.77□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms