Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Gm3267-201ENSMUST00000118671 473 ntBASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Gm12281-201ENSMUST00000119536 298 ntBASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Gm25179-201ENSMUST00000122632 128 ntBASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Gm5929-201ENSMUST00000166883 487 ntBASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Mir5103-201ENSMUST00000175111 79 ntBASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Gm26365-201ENSMUST00000179177 94 ntBASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Gm28976-201ENSMUST00000188070 144 ntBASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Gm28468-201ENSMUST00000188536 615 ntBASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Gm37288-201ENSMUST00000193963 334 ntBASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Gm33973-201ENSMUST00000195148 534 ntBASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Gm43350-201ENSMUST00000196382 711 ntBASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 BX530055.1-201ENSMUST00000197285 122 ntBASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Gm2623-201ENSMUST00000199229 286 ntBASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Gm18127-201ENSMUST00000208479 725 ntBASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Gm6171-201ENSMUST00000220760 645 ntBASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 AC137871.2-201ENSMUST00000226482 289 ntBASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Gm44739-201ENSMUST00000205294 1426 ntBASIC5.06□□□□□ -1.6
Ubfd1Q78JW9 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 n-R5s82-201ENSMUST00000104213 109 ntBASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Gm15670-201ENSMUST00000117740 447 ntBASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Gm12007-201ENSMUST00000120978 597 ntBASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Gm23354-201ENSMUST00000158426 104 ntBASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Gm25348-201ENSMUST00000158961 111 ntBASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Gm17377-201ENSMUST00000165184 207 ntBASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Gm17086-201ENSMUST00000171346 484 ntBASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Gm25944-201ENSMUST00000178758 94 ntBASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Gm26731-201ENSMUST00000180683 543 ntBASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Gm26915-201ENSMUST00000183080 748 ntBASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Gm27551-201ENSMUST00000184258 77 ntBASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Gm29664-201ENSMUST00000191125 463 ntBASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Gm19599-201ENSMUST00000218898 358 ntBASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 AC079644.1-201ENSMUST00000220586 405 ntBASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Gm46996-201ENSMUST00000220924 408 ntBASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 AC159263.3-201ENSMUST00000223434 460 ntBASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 AC167669.3-201ENSMUST00000224720 393 ntBASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Gm25260-201ENSMUST00000083053 134 ntBASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ubfd1Q78JW9 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Gm16089-201ENSMUST00000117679 336 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms