Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC4.6□□□□□ -1.67
Sdc3Q64519 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Sdc3Q64519 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Sdc3Q64519 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Sdc3Q64519 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Sdc3Q64519 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC4.6□□□□□ -1.67
Sdc3Q64519 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC4.6□□□□□ -1.67
Sdc3Q64519 Gm44402-201ENSMUST00000203677 238 ntBASIC4.6□□□□□ -1.67
Sdc3Q64519 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC4.6□□□□□ -1.67
Sdc3Q64519 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Sdc3Q64519 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.6□□□□□ -1.67
Sdc3Q64519 AC132104.1-201ENSMUST00000213615 260 ntBASIC4.6□□□□□ -1.67
Sdc3Q64519 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC4.6□□□□□ -1.67
Sdc3Q64519 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Sdc3Q64519 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC4.6□□□□□ -1.67
Sdc3Q64519 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Sdc3Q64519 AC098742.1-201ENSMUST00000227945 373 ntBASIC4.6□□□□□ -1.67
Sdc3Q64519 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Sdc3Q64519 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Sdc3Q64519 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Sdc3Q64519 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Sdc3Q64519 AC190403.1-201ENSMUST00000224515 1325 ntBASIC4.6□□□□□ -1.67
Sdc3Q64519 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Sdc3Q64519 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC4.6□□□□□ -1.67
Sdc3Q64519 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Sdc3Q64519 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Sdc3Q64519 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Sdc3Q64519 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
Sdc3Q64519 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC4.6□□□□□ -1.67
Sdc3Q64519 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Sdc3Q64519 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Sdc3Q64519 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.6□□□□□ -1.67
Sdc3Q64519 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Sdc3Q64519 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Sdc3Q64519 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC4.59□□□□□ -1.67
Sdc3Q64519 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Sdc3Q64519 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Sdc3Q64519 Gm42729-201ENSMUST00000201770 2930 ntBASIC4.59□□□□□ -1.67
Sdc3Q64519 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Sdc3Q64519 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.59□□□□□ -1.67
Sdc3Q64519 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Sdc3Q64519 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Sdc3Q64519 Gm24855-201ENSMUST00000104848 97 ntBASIC4.59□□□□□ -1.67
Sdc3Q64519 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Sdc3Q64519 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Sdc3Q64519 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.59□□□□□ -1.67
Sdc3Q64519 Gm15161-201ENSMUST00000117340 387 ntBASIC4.59□□□□□ -1.67
Sdc3Q64519 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC4.59□□□□□ -1.67
Sdc3Q64519 Anp32-ps-201ENSMUST00000118265 388 ntBASIC4.59□□□□□ -1.67
Sdc3Q64519 Gm13172-201ENSMUST00000118685 256 ntBASIC4.59□□□□□ -1.67
Sdc3Q64519 Gm22343-201ENSMUST00000122648 286 ntBASIC4.59□□□□□ -1.67
Sdc3Q64519 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Sdc3Q64519 Gm24441-201ENSMUST00000157235 281 ntBASIC4.59□□□□□ -1.67
Sdc3Q64519 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Sdc3Q64519 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Sdc3Q64519 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Sdc3Q64519 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Sdc3Q64519 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Sdc3Q64519 Gm26828-201ENSMUST00000180640 172 ntBASIC4.59□□□□□ -1.67
Sdc3Q64519 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Sdc3Q64519 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC4.59□□□□□ -1.67
Sdc3Q64519 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Sdc3Q64519 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC4.59□□□□□ -1.67
Sdc3Q64519 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC4.59□□□□□ -1.67
Sdc3Q64519 Gm37303-201ENSMUST00000194202 1559 ntBASIC4.59□□□□□ -1.67
Sdc3Q64519 Gm18150-201ENSMUST00000195341 645 ntBASIC4.59□□□□□ -1.67
Sdc3Q64519 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC4.59□□□□□ -1.67
Sdc3Q64519 Gm44656-201ENSMUST00000208428 490 ntBASIC4.59□□□□□ -1.67
Sdc3Q64519 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC4.59□□□□□ -1.67
Sdc3Q64519 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Sdc3Q64519 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.59□□□□□ -1.67
Sdc3Q64519 AC102542.1-201ENSMUST00000225204 1138 ntBASIC4.59□□□□□ -1.67
Sdc3Q64519 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.59□□□□□ -1.67
Sdc3Q64519 AC151907.1-201ENSMUST00000228812 412 ntBASIC4.59□□□□□ -1.67
Sdc3Q64519 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Sdc3Q64519 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Sdc3Q64519 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC4.59□□□□□ -1.67
Sdc3Q64519 Snora52-201ENSMUST00000082732 137 ntBASIC4.59□□□□□ -1.67
Sdc3Q64519 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Sdc3Q64519 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Sdc3Q64519 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.59□□□□□ -1.68
Sdc3Q64519 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
Sdc3Q64519 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.59□□□□□ -1.68
Sdc3Q64519 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Sdc3Q64519 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Sdc3Q64519 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Sdc3Q64519 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Sdc3Q64519 Gm37407-201ENSMUST00000194793 1316 ntBASIC4.58□□□□□ -1.68
Sdc3Q64519 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Sdc3Q64519 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Sdc3Q64519 Gm12520-201ENSMUST00000117493 316 ntBASIC4.58□□□□□ -1.68
Sdc3Q64519 Gm12392-201ENSMUST00000118014 938 ntBASIC4.58□□□□□ -1.68
Sdc3Q64519 Gm12448-201ENSMUST00000118852 655 ntBASIC4.58□□□□□ -1.68
Sdc3Q64519 Gm15225-201ENSMUST00000120449 1017 ntBASIC4.58□□□□□ -1.68
Sdc3Q64519 Gm7840-201ENSMUST00000122086 533 ntBASIC4.58□□□□□ -1.68
Sdc3Q64519 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC4.58□□□□□ -1.68
Sdc3Q64519 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Sdc3Q64519 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Sdc3Q64519 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Sdc3Q64519 Gm26487-201ENSMUST00000158022 94 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms