Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NcanP55066 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NcanP55066 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.04□□□□□ -1.6
NcanP55066 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
NcanP55066 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.04□□□□□ -1.6
NcanP55066 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
NcanP55066 Gm42704-201ENSMUST00000196875 1778 ntBASIC5.04□□□□□ -1.6
NcanP55066 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NcanP55066 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
NcanP55066 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
NcanP55066 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
NcanP55066 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
NcanP55066 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
NcanP55066 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
NcanP55066 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NcanP55066 Gm15385-201ENSMUST00000118725 667 ntBASIC5.04□□□□□ -1.6
NcanP55066 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC5.04□□□□□ -1.6
NcanP55066 Gm11369-201ENSMUST00000120812 318 ntBASIC5.04□□□□□ -1.6
NcanP55066 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.04□□□□□ -1.6
NcanP55066 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC5.04□□□□□ -1.6
NcanP55066 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC5.04□□□□□ -1.6
NcanP55066 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC5.04□□□□□ -1.6
NcanP55066 Gm23743-201ENSMUST00000157389 274 ntBASIC5.04□□□□□ -1.6
NcanP55066 Gm26355-201ENSMUST00000158220 105 ntBASIC5.04□□□□□ -1.6
NcanP55066 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC5.04□□□□□ -1.6
NcanP55066 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC5.04□□□□□ -1.6
NcanP55066 Gm23816-201ENSMUST00000179617 132 ntBASIC5.04□□□□□ -1.6
NcanP55066 Mir7081-201ENSMUST00000184490 75 ntBASIC5.04□□□□□ -1.6
NcanP55066 Gm27781-201ENSMUST00000185185 92 ntBASIC5.04□□□□□ -1.6
NcanP55066 Gm29320-201ENSMUST00000185235 615 ntBASIC5.04□□□□□ -1.6
NcanP55066 Gm29179-202ENSMUST00000186138 615 ntBASIC5.04□□□□□ -1.6
NcanP55066 Gm28871-201ENSMUST00000186191 687 ntBASIC5.04□□□□□ -1.6
NcanP55066 Gm28598-201ENSMUST00000186490 615 ntBASIC5.04□□□□□ -1.6
NcanP55066 Gm29448-201ENSMUST00000186675 615 ntBASIC5.04□□□□□ -1.6
NcanP55066 Gm29314-201ENSMUST00000186800 615 ntBASIC5.04□□□□□ -1.6
NcanP55066 Gm28253-202ENSMUST00000187971 615 ntBASIC5.04□□□□□ -1.6
NcanP55066 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.04□□□□□ -1.6
NcanP55066 Gm29268-201ENSMUST00000188669 615 ntBASIC5.04□□□□□ -1.6
NcanP55066 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC5.04□□□□□ -1.6
NcanP55066 Gm29169-201ENSMUST00000189835 615 ntBASIC5.04□□□□□ -1.6
NcanP55066 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NcanP55066 Gm28978-201ENSMUST00000191120 615 ntBASIC5.04□□□□□ -1.6
NcanP55066 Gm37172-201ENSMUST00000191926 615 ntBASIC5.04□□□□□ -1.6
NcanP55066 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NcanP55066 Gm36382-201ENSMUST00000198892 541 ntBASIC5.04□□□□□ -1.6
NcanP55066 Gm20074-201ENSMUST00000208144 484 ntBASIC5.04□□□□□ -1.6
NcanP55066 AC134254.4-201ENSMUST00000223086 370 ntBASIC5.04□□□□□ -1.6
NcanP55066 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.04□□□□□ -1.6
NcanP55066 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NcanP55066 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NcanP55066 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
NcanP55066 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NcanP55066 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NcanP55066 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NcanP55066 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
NcanP55066 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NcanP55066 AC156569.1-201ENSMUST00000222020 3841 ntBASIC5.04□□□□□ -1.6
NcanP55066 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NcanP55066 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NcanP55066 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
NcanP55066 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NcanP55066 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NcanP55066 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NcanP55066 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.03□□□□□ -1.6
NcanP55066 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.03□□□□□ -1.6
NcanP55066 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.03□□□□□ -1.6
NcanP55066 Gm26143-201ENSMUST00000104480 108 ntBASIC5.03□□□□□ -1.6
NcanP55066 Gm22498-201ENSMUST00000104497 86 ntBASIC5.03□□□□□ -1.6
NcanP55066 Gm14621-201ENSMUST00000117709 689 ntBASIC5.03□□□□□ -1.6
NcanP55066 Gm14303-201ENSMUST00000121320 171 ntBASIC5.03□□□□□ -1.6
NcanP55066 Gm22160-201ENSMUST00000158405 328 ntBASIC5.03□□□□□ -1.6
NcanP55066 Mir7578-201ENSMUST00000183455 82 ntBASIC5.03□□□□□ -1.6
NcanP55066 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC5.03□□□□□ -1.6
NcanP55066 Gm44319-201ENSMUST00000196974 93 ntBASIC5.03□□□□□ -1.6
NcanP55066 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC5.03□□□□□ -1.6
NcanP55066 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC5.03□□□□□ -1.6
NcanP55066 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NcanP55066 Gm39197-201ENSMUST00000212069 457 ntBASIC5.03□□□□□ -1.6
NcanP55066 AL589742.1-201ENSMUST00000226034 349 ntBASIC5.03□□□□□ -1.6
NcanP55066 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
NcanP55066 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
NcanP55066 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
NcanP55066 Gm23927-201ENSMUST00000082466 215 ntBASIC5.03□□□□□ -1.6
NcanP55066 Mir383-201ENSMUST00000083523 70 ntBASIC5.03□□□□□ -1.6
NcanP55066 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
NcanP55066 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
NcanP55066 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NcanP55066 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
NcanP55066 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.03□□□□□ -1.6
NcanP55066 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NcanP55066 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NcanP55066 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NcanP55066 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC5.02□□□□□ -1.61
NcanP55066 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NcanP55066 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
NcanP55066 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NcanP55066 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NcanP55066 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
NcanP55066 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
NcanP55066 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms