Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC6.12□□□□□ -1.43
Sox1P53783 CT030185.1-201ENSMUST00000222940 2289 ntBASIC6.12□□□□□ -1.43
Sox1P53783 AC167013.2-202ENSMUST00000227035 333 ntBASIC6.12□□□□□ -1.43
Sox1P53783 AC116319.2-201ENSMUST00000228159 984 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Sox1P53783 Gm10062-201ENSMUST00000072180 1470 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Sox1P53783 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox1P53783 n-R5s37-201ENSMUST00000082533 118 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Gm24460-201ENSMUST00000082731 106 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox1P53783 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox1P53783 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sox1P53783 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Sox1P53783 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sox1P53783 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox1P53783 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sox1P53783 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC6.11□□□□□ -1.43
Sox1P53783 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sox1P53783 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC6.11□□□□□ -1.43
Sox1P53783 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.11□□□□□ -1.43
Sox1P53783 Gm13340-201ENSMUST00000117219 1545 ntBASIC6.11□□□□□ -1.43
Sox1P53783 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Sox1P53783 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sox1P53783 Gm38278-201ENSMUST00000194715 1365 ntBASIC6.11□□□□□ -1.43
Sox1P53783 Gm7451-201ENSMUST00000208382 1392 ntBASIC6.11□□□□□ -1.43
Sox1P53783 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sox1P53783 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Sox1P53783 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC6.11□□□□□ -1.43
Sox1P53783 Gm12937-201ENSMUST00000118333 448 ntBASIC6.11□□□□□ -1.43
Sox1P53783 Gm11881-201ENSMUST00000119408 572 ntBASIC6.11□□□□□ -1.43
Sox1P53783 Gm12515-201ENSMUST00000120116 361 ntBASIC6.11□□□□□ -1.43
Sox1P53783 Gm14796-201ENSMUST00000121216 959 ntBASIC6.11□□□□□ -1.43
Sox1P53783 Gm11805-201ENSMUST00000121238 600 ntBASIC6.11□□□□□ -1.43
Sox1P53783 Gm13409-201ENSMUST00000122072 546 ntBASIC6.11□□□□□ -1.43
Sox1P53783 n-R5s24-201ENSMUST00000122518 117 ntBASIC6.11□□□□□ -1.43
Sox1P53783 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC6.11□□□□□ -1.43
Sox1P53783 Gm11507-201ENSMUST00000156462 412 ntBASIC6.11□□□□□ -1.43
Sox1P53783 Gm25057-201ENSMUST00000157366 88 ntBASIC6.11□□□□□ -1.43
Sox1P53783 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC6.11□□□□□ -1.43
Sox1P53783 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC6.11□□□□□ -1.43
Sox1P53783 Mir5106-201ENSMUST00000174936 73 ntBASIC6.11□□□□□ -1.43
Sox1P53783 Gm23164-201ENSMUST00000175084 111 ntBASIC6.11□□□□□ -1.43
Sox1P53783 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Sox1P53783 Gm25451-201ENSMUST00000177832 121 ntBASIC6.11□□□□□ -1.43
Sox1P53783 Gm25284-201ENSMUST00000180345 141 ntBASIC6.11□□□□□ -1.43
Sox1P53783 Gm27976-201ENSMUST00000183635 162 ntBASIC6.11□□□□□ -1.43
Sox1P53783 Gm37272-201ENSMUST00000193401 488 ntBASIC6.11□□□□□ -1.43
Sox1P53783 Gm44494-201ENSMUST00000196760 129 ntBASIC6.11□□□□□ -1.43
Sox1P53783 Gm43070-201ENSMUST00000196938 415 ntBASIC6.11□□□□□ -1.43
Sox1P53783 Gm4714-201ENSMUST00000203395 279 ntBASIC6.11□□□□□ -1.43
Sox1P53783 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC6.11□□□□□ -1.43
Sox1P53783 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC6.11□□□□□ -1.43
Sox1P53783 AC154296.2-201ENSMUST00000214696 545 ntBASIC6.11□□□□□ -1.43
Sox1P53783 Gm19219-201ENSMUST00000215863 724 ntBASIC6.11□□□□□ -1.43
Sox1P53783 Gm18891-201ENSMUST00000216734 1087 ntBASIC6.11□□□□□ -1.43
Sox1P53783 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC6.11□□□□□ -1.43
Sox1P53783 AC140288.1-201ENSMUST00000226329 503 ntBASIC6.11□□□□□ -1.43
Sox1P53783 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC6.11□□□□□ -1.43
Sox1P53783 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Sox1P53783 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC6.11□□□□□ -1.43
Sox1P53783 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sox1P53783 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sox1P53783 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Sox1P53783 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sox1P53783 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Sox1P53783 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sox1P53783 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Sox1P53783 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
Sox1P53783 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC6.11□□□□□ -1.43
Sox1P53783 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sox1P53783 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Sox1P53783 AC158779.2-201ENSMUST00000227902 1947 ntBASIC6.11□□□□□ -1.43
Sox1P53783 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Sox1P53783 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sox1P53783 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.1□□□□□ -1.43
Sox1P53783 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sox1P53783 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sox1P53783 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sox1P53783 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sox1P53783 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.1□□□□□ -1.43
Sox1P53783 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Sox1P53783 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Sox1P53783 Gm43637-201ENSMUST00000202206 2926 ntBASIC6.1□□□□□ -1.43
Sox1P53783 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Sox1P53783 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sox1P53783 Gm26996-201ENSMUST00000204418 1359 ntBASIC6.1□□□□□ -1.43
Sox1P53783 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sox1P53783 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Sox1P53783 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sox1P53783 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
Sox1P53783 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sox1P53783 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Sox1P53783 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Sox1P53783 Gm24117-201ENSMUST00000103973 133 ntBASIC6.1□□□□□ -1.43
Sox1P53783 Gm11898-201ENSMUST00000117161 385 ntBASIC6.1□□□□□ -1.43
Sox1P53783 Gm13733-201ENSMUST00000117290 535 ntBASIC6.1□□□□□ -1.43
Sox1P53783 Gm15382-201ENSMUST00000118011 537 ntBASIC6.1□□□□□ -1.43
Sox1P53783 Gm15988-201ENSMUST00000118677 367 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms