Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Dennd6a-204ENSMUST00000224248 2775 ntBASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Gm24273-201ENSMUST00000102332 164 ntBASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Gm22952-201ENSMUST00000116720 120 ntBASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Gm11898-201ENSMUST00000117161 385 ntBASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Gm11881-201ENSMUST00000119408 572 ntBASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Gm14883-201ENSMUST00000120179 157 ntBASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Gm2768-201ENSMUST00000121062 250 ntBASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Gm12755-201ENSMUST00000122297 282 ntBASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Gm22116-201ENSMUST00000158791 141 ntBASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Gm15974-201ENSMUST00000159103 531 ntBASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Gm24812-201ENSMUST00000175315 284 ntBASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Gm26557-201ENSMUST00000180756 493 ntBASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Gm38075-201ENSMUST00000191979 920 ntBASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Gm36985-201ENSMUST00000195595 379 ntBASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Gm45722-201ENSMUST00000213075 466 ntBASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Gm9292-201ENSMUST00000222008 710 ntBASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 AC131745.2-201ENSMUST00000225736 565 ntBASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 CT025602.1-201ENSMUST00000227281 382 ntBASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 AC113031.1-201ENSMUST00000227400 432 ntBASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Gm5832-201ENSMUST00000121704 1582 ntBASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Gm16270-201ENSMUST00000160327 3238 ntBASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC5.23□□□□□ -1.57
Pcdh1F7BJK1 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm43201-201ENSMUST00000195925 3416 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm11561-201ENSMUST00000117429 417 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm11270-201ENSMUST00000117685 471 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm12878-201ENSMUST00000118744 332 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm11352-201ENSMUST00000119264 517 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm5287-201ENSMUST00000120666 598 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm11679-201ENSMUST00000121830 779 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm12438-201ENSMUST00000122034 336 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Rps29-ps-201ENSMUST00000122083 172 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm22434-201ENSMUST00000158549 122 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 109.3 ms