Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 AL669916.5-201ENSMUST00000214874 361 ntBASIC4.23□□□□□ -1.73
Col6a3E9PWQ3 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Col6a3E9PWQ3 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC4.23□□□□□ -1.73
Col6a3E9PWQ3 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col6a3E9PWQ3 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col6a3E9PWQ3 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col6a3E9PWQ3 Gm13329-201ENSMUST00000117063 265 ntBASIC4.23□□□□□ -1.73
Col6a3E9PWQ3 Gm13268-201ENSMUST00000117485 433 ntBASIC4.23□□□□□ -1.73
Col6a3E9PWQ3 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Col6a3E9PWQ3 Gm5974-201ENSMUST00000181607 986 ntBASIC4.23□□□□□ -1.73
Col6a3E9PWQ3 Gm28594-201ENSMUST00000187022 661 ntBASIC4.23□□□□□ -1.73
Col6a3E9PWQ3 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC4.23□□□□□ -1.73
Col6a3E9PWQ3 AC127270.2-201ENSMUST00000221337 247 ntBASIC4.23□□□□□ -1.73
Col6a3E9PWQ3 Gm8231-201ENSMUST00000221617 783 ntBASIC4.23□□□□□ -1.73
Col6a3E9PWQ3 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.23□□□□□ -1.73
Col6a3E9PWQ3 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Col6a3E9PWQ3 Gm10933-201ENSMUST00000221891 1861 ntBASIC4.23□□□□□ -1.73
Col6a3E9PWQ3 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col6a3E9PWQ3 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Col6a3E9PWQ3 AC159896.3-201ENSMUST00000215904 3835 ntBASIC4.23□□□□□ -1.73
Col6a3E9PWQ3 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Col6a3E9PWQ3 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.23□□□□□ -1.73
Col6a3E9PWQ3 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Col6a3E9PWQ3 Gm43011-201ENSMUST00000197897 4433 ntBASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Gm23215-201ENSMUST00000178153 121 ntBASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Vmn1r199-203ENSMUST00000227689 5537 ntAPPRIS ALT2 BASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Gm37115-201ENSMUST00000193750 2849 ntBASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Gm22674-201ENSMUST00000104413 131 ntBASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Gm11372-201ENSMUST00000117348 570 ntBASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Gm14605-201ENSMUST00000120599 268 ntBASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Gm23380-201ENSMUST00000158448 103 ntBASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Gm42451-201ENSMUST00000197410 244 ntBASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Gm43825-201ENSMUST00000199650 734 ntBASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Gm44946-201ENSMUST00000208425 572 ntBASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Mir6996-201ENSMUST00000183922 61 ntBASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Gm3933-201ENSMUST00000195391 439 ntBASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Gm44099-201ENSMUST00000203299 112 ntBASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Gm25800-201ENSMUST00000082636 134 ntBASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Gm14849-201ENSMUST00000122293 2846 ntBASIC4.22□□□□□ -1.73
Col6a3E9PWQ3 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Col6a3E9PWQ3 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Col6a3E9PWQ3 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Col6a3E9PWQ3 Rab11b-201ENSMUST00000057373 6109 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 Gm23060-201ENSMUST00000102345 109 ntBASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 Gm13803-201ENSMUST00000117547 489 ntBASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 Gm28010-201ENSMUST00000179485 126 ntBASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 CT025710.1-201ENSMUST00000222949 2533 ntBASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 Gm11600-201ENSMUST00000119592 240 ntBASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 Gm11982-201ENSMUST00000121480 314 ntBASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 Gm8289-201ENSMUST00000144814 1182 ntBASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 Gm27899-201ENSMUST00000184715 64 ntBASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 Gm44023-201ENSMUST00000203710 469 ntBASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 Gm37087-201ENSMUST00000192966 3309 ntBASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 Gm37752-201ENSMUST00000193494 3309 ntBASIC4.21□□□□□ -1.74
Col6a3E9PWQ3 Gm10513-201ENSMUST00000194203 6468 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms