Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Gm2a-201ENSMUST00000000608 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Foxp3-202ENSMUST00000115738 3681 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 C2cd5-207ENSMUST00000203673 3332 ntTSL 5 BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Mroh3-205ENSMUST00000212798 2933 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Krtap16-1-201ENSMUST00000105050 1888 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Pigq-202ENSMUST00000097368 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Gm19178-201ENSMUST00000217524 1819 ntBASIC1.24□□□□□ -2.21
Gm4559A4IF42 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Gm29100-201ENSMUST00000187564 4410 ntBASIC1.24□□□□□ -2.21
Gm4559A4IF42 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Mapk6-202ENSMUST00000168937 4089 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Iars-201ENSMUST00000047363 4396 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Filip1-201ENSMUST00000093811 4640 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Gm4559A4IF42 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Gm4559A4IF42 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
Gm4559A4IF42 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Gm4559A4IF42 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
Gm4559A4IF42 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Gm4559A4IF42 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
Gm4559A4IF42 Dpf2-205ENSMUST00000136983 3314 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Gm4559A4IF42 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC1.23□□□□□ -2.21
Gm4559A4IF42 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Gm4559A4IF42 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Gm4559A4IF42 Mybpc2-201ENSMUST00000165208 3611 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Gm4559A4IF42 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
Gm4559A4IF42 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
Gm4559A4IF42 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Gm4559A4IF42 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Gm4559A4IF42 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Gm4559A4IF42 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC1.23□□□□□ -2.21
Gm4559A4IF42 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
Gm4559A4IF42 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Gm4559A4IF42 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
Gm4559A4IF42 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Gm4559A4IF42 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC1.23□□□□□ -2.21
Gm4559A4IF42 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Gm4559A4IF42 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC1.23□□□□□ -2.21
Gm4559A4IF42 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 134.7 ms