Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Scn3aA2ASI5 Gm10916-201ENSMUST00000080330 483 ntBASIC4.8□□□□□ -1.64
Scn3aA2ASI5 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Scn3aA2ASI5 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Scn3aA2ASI5 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Scn3aA2ASI5 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Scn3aA2ASI5 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Scn3aA2ASI5 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Scn3aA2ASI5 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Scn3aA2ASI5 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Scn3aA2ASI5 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.8□□□□□ -1.64
Scn3aA2ASI5 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Scn3aA2ASI5 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Scn3aA2ASI5 Gm23133-201ENSMUST00000104255 135 ntBASIC4.8□□□□□ -1.64
Scn3aA2ASI5 Gm15151-201ENSMUST00000117106 177 ntBASIC4.8□□□□□ -1.64
Scn3aA2ASI5 Gm13386-201ENSMUST00000117677 124 ntBASIC4.8□□□□□ -1.64
Scn3aA2ASI5 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Scn3aA2ASI5 AC134333.1-201ENSMUST00000204536 944 ntBASIC4.8□□□□□ -1.64
Scn3aA2ASI5 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.8□□□□□ -1.64
Scn3aA2ASI5 AC166263.1-201ENSMUST00000218586 238 ntBASIC4.8□□□□□ -1.64
Scn3aA2ASI5 AC133189.2-201ENSMUST00000228527 392 ntBASIC4.8□□□□□ -1.64
Scn3aA2ASI5 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Scn3aA2ASI5 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Scn3aA2ASI5 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Scn3aA2ASI5 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Scn3aA2ASI5 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.79□□□□□ -1.64
Scn3aA2ASI5 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
Scn3aA2ASI5 Gm44847-201ENSMUST00000207104 1991 ntBASIC4.79□□□□□ -1.64
Scn3aA2ASI5 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Scn3aA2ASI5 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Scn3aA2ASI5 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Scn3aA2ASI5 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.79□□□□□ -1.64
Scn3aA2ASI5 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Scn3aA2ASI5 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Scn3aA2ASI5 Gm26418-201ENSMUST00000104275 137 ntBASIC4.79□□□□□ -1.64
Scn3aA2ASI5 Gm14473-201ENSMUST00000122269 557 ntBASIC4.79□□□□□ -1.64
Scn3aA2ASI5 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC4.79□□□□□ -1.64
Scn3aA2ASI5 Gm29634-201ENSMUST00000188467 696 ntBASIC4.79□□□□□ -1.64
Scn3aA2ASI5 Gm28699-201ENSMUST00000189193 696 ntBASIC4.79□□□□□ -1.64
Scn3aA2ASI5 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC4.79□□□□□ -1.64
Scn3aA2ASI5 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.79□□□□□ -1.64
Scn3aA2ASI5 Gm43855-201ENSMUST00000197462 507 ntBASIC4.79□□□□□ -1.64
Scn3aA2ASI5 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC4.79□□□□□ -1.64
Scn3aA2ASI5 Gm5885-202ENSMUST00000203357 528 ntBASIC4.79□□□□□ -1.64
Scn3aA2ASI5 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.79□□□□□ -1.64
Scn3aA2ASI5 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC4.79□□□□□ -1.64
Scn3aA2ASI5 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Scn3aA2ASI5 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC4.79□□□□□ -1.64
Scn3aA2ASI5 AC158807.1-201ENSMUST00000217959 187 ntBASIC4.79□□□□□ -1.64
Scn3aA2ASI5 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC4.79□□□□□ -1.64
Scn3aA2ASI5 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC4.79□□□□□ -1.64
Scn3aA2ASI5 AC156803.1-201ENSMUST00000224407 820 ntBASIC4.79□□□□□ -1.64
Scn3aA2ASI5 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Scn3aA2ASI5 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Scn3aA2ASI5 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Scn3aA2ASI5 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Scn3aA2ASI5 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Scn3aA2ASI5 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Scn3aA2ASI5 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC4.79□□□□□ -1.64
Scn3aA2ASI5 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Scn3aA2ASI5 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Scn3aA2ASI5 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Scn3aA2ASI5 AC124446.1-201ENSMUST00000221027 2644 ntBASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Gm5155-201ENSMUST00000072381 2841 ntBASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Gm1866-201ENSMUST00000120701 477 ntBASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Gm10059-201ENSMUST00000131139 171 ntBASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Gm4487-201ENSMUST00000150617 442 ntBASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Gm25386-201ENSMUST00000157814 288 ntBASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Gm22120-201ENSMUST00000175590 70 ntBASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Gm44543-201ENSMUST00000209136 396 ntBASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Gm31931-201ENSMUST00000219666 222 ntBASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.78□□□□□ -1.64
Scn3aA2ASI5 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Scn3aA2ASI5 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Gm12173-201ENSMUST00000117622 273 ntBASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Gm12427-201ENSMUST00000117719 302 ntBASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Gm11692-201ENSMUST00000122121 902 ntBASIC4.78□□□□□ -1.64
Scn3aA2ASI5 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Gm43649-201ENSMUST00000196596 391 ntBASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Gm43315-201ENSMUST00000198120 313 ntBASIC4.78□□□□□ -1.64
Scn3aA2ASI5 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms