Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC4.31□□□□□ -1.72
Cdc40Q9DC48 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC4.31□□□□□ -1.72
Cdc40Q9DC48 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC4.31□□□□□ -1.72
Cdc40Q9DC48 AC073947.1-201ENSMUST00000216991 649 ntBASIC4.31□□□□□ -1.72
Cdc40Q9DC48 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.31□□□□□ -1.72
Cdc40Q9DC48 AC158536.1-201ENSMUST00000222510 256 ntBASIC4.31□□□□□ -1.72
Cdc40Q9DC48 AC159263.3-201ENSMUST00000223434 460 ntBASIC4.31□□□□□ -1.72
Cdc40Q9DC48 AL589696.1-201ENSMUST00000225711 330 ntBASIC4.31□□□□□ -1.72
Cdc40Q9DC48 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.31□□□□□ -1.72
Cdc40Q9DC48 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Cdc40Q9DC48 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Cdc40Q9DC48 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Cdc40Q9DC48 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Cdc40Q9DC48 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Cdc40Q9DC48 Gm6177-201ENSMUST00000085589 465 ntBASIC4.31□□□□□ -1.72
Cdc40Q9DC48 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC4.31□□□□□ -1.72
Cdc40Q9DC48 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Cdc40Q9DC48 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Cdc40Q9DC48 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Cdc40Q9DC48 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Cdc40Q9DC48 Gm10997-201ENSMUST00000210294 1500 ntBASIC4.31□□□□□ -1.72
Cdc40Q9DC48 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Cdc40Q9DC48 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
Cdc40Q9DC48 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Gm24124-201ENSMUST00000104103 132 ntBASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Gm15333-201ENSMUST00000118825 364 ntBASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Gm11325-201ENSMUST00000119967 469 ntBASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Gm13000-201ENSMUST00000120937 496 ntBASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Gm25923-201ENSMUST00000158312 138 ntBASIC4.3□□□□□ -1.72
Cdc40Q9DC48 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Mir6418-201ENSMUST00000185075 115 ntBASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Gm29484-201ENSMUST00000186067 324 ntBASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Gm18181-201ENSMUST00000190670 736 ntBASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Gm8939-201ENSMUST00000192577 964 ntBASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Gm37710-201ENSMUST00000193501 1274 ntBASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Gm9655-201ENSMUST00000211321 1284 ntBASIC4.3□□□□□ -1.72
Cdc40Q9DC48 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Gm6171-201ENSMUST00000220760 645 ntBASIC4.3□□□□□ -1.72
Cdc40Q9DC48 AC154198.1-201ENSMUST00000222839 424 ntBASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Gm16415-201ENSMUST00000080097 489 ntBASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Snora52-201ENSMUST00000082732 137 ntBASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.3□□□□□ -1.72
Cdc40Q9DC48 AC187103.2-201ENSMUST00000223605 1617 ntBASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Cdc40Q9DC48 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Cdc40Q9DC48 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Gm15206-201ENSMUST00000119143 454 ntBASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Gm13815-201ENSMUST00000119963 412 ntBASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Gm13532-201ENSMUST00000120373 240 ntBASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Gm22158-201ENSMUST00000158411 126 ntBASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Gm23179-201ENSMUST00000158693 304 ntBASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC4.29□□□□□ -1.72
Cdc40Q9DC48 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Gm29556-201ENSMUST00000187591 696 ntBASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Gm21617-201ENSMUST00000188297 691 ntBASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Gm43825-201ENSMUST00000199650 734 ntBASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Gm44138-201ENSMUST00000204939 271 ntBASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Gm44779-201ENSMUST00000206937 708 ntBASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Olfr1309-201ENSMUST00000207885 964 ntBASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Gm45269-201ENSMUST00000210359 282 ntBASIC4.29□□□□□ -1.72
Cdc40Q9DC48 AC159622.1-201ENSMUST00000221004 554 ntBASIC4.29□□□□□ -1.72
Cdc40Q9DC48 CT025689.2-201ENSMUST00000224979 429 ntBASIC4.29□□□□□ -1.72
Cdc40Q9DC48 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.29□□□□□ -1.72
Cdc40Q9DC48 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Mir99a-201ENSMUST00000083596 65 ntBASIC4.29□□□□□ -1.72
Cdc40Q9DC48 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms