Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Col6a6Q8C6K9 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Col6a6Q8C6K9 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC3.89□□□□□ -1.79
Col6a6Q8C6K9 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC3.89□□□□□ -1.79
Col6a6Q8C6K9 Gm3675-201ENSMUST00000175904 1653 ntBASIC3.89□□□□□ -1.79
Col6a6Q8C6K9 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Col6a6Q8C6K9 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Col6a6Q8C6K9 Gm13195-201ENSMUST00000117229 261 ntBASIC3.89□□□□□ -1.79
Col6a6Q8C6K9 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC3.89□□□□□ -1.79
Col6a6Q8C6K9 Gm12062-201ENSMUST00000117533 259 ntBASIC3.89□□□□□ -1.79
Col6a6Q8C6K9 Gm14619-201ENSMUST00000120480 168 ntBASIC3.89□□□□□ -1.79
Col6a6Q8C6K9 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC3.89□□□□□ -1.79
Col6a6Q8C6K9 Gm28492-201ENSMUST00000190899 1019 ntBASIC3.89□□□□□ -1.79
Col6a6Q8C6K9 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC3.89□□□□□ -1.79
Col6a6Q8C6K9 Gm44779-201ENSMUST00000206937 708 ntBASIC3.89□□□□□ -1.79
Col6a6Q8C6K9 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC3.89□□□□□ -1.79
Col6a6Q8C6K9 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.89□□□□□ -1.79
Col6a6Q8C6K9 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.89□□□□□ -1.79
Col6a6Q8C6K9 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC3.89□□□□□ -1.79
Col6a6Q8C6K9 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Col6a6Q8C6K9 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Col6a6Q8C6K9 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Col6a6Q8C6K9 Gm13854-201ENSMUST00000121183 1679 ntBASIC3.89□□□□□ -1.79
Col6a6Q8C6K9 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
Col6a6Q8C6K9 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Col6a6Q8C6K9 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Gm13268-201ENSMUST00000117485 433 ntBASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Gm43428-201ENSMUST00000200108 3845 ntBASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Gm18120-201ENSMUST00000220079 511 ntBASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Gm5374-202ENSMUST00000222910 314 ntBASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 AC158605.3-201ENSMUST00000218999 2538 ntBASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 AC115970.1-201ENSMUST00000218910 1758 ntBASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 AC169985.1-201ENSMUST00000223648 2439 ntBASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Gm45359-201ENSMUST00000210635 427 ntBASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Gm45796-201ENSMUST00000212483 114 ntBASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 AC122305.2-201ENSMUST00000215148 834 ntBASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Olfr713-201ENSMUST00000098139 975 ntBASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Gm45061-201ENSMUST00000204395 2095 ntBASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Gm37115-201ENSMUST00000193750 2849 ntBASIC3.88□□□□□ -1.79
Col6a6Q8C6K9 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 Gm15185-201ENSMUST00000117397 746 ntBASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 Gm23959-201ENSMUST00000157208 324 ntBASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 Gm23098-201ENSMUST00000157552 299 ntBASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 Gm38201-201ENSMUST00000192143 387 ntBASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 Gm43037-201ENSMUST00000196808 250 ntBASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 Gm45727-201ENSMUST00000212886 572 ntBASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 Gm17779-201ENSMUST00000213395 394 ntBASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 Gm43577-201ENSMUST00000197090 3344 ntBASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 Gm12931-201ENSMUST00000117046 324 ntBASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 Gm11200-201ENSMUST00000121698 448 ntBASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 Gm14587-201ENSMUST00000121714 658 ntBASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 Trbv28-201ENSMUST00000192804 264 ntBASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 Gm7786-201ENSMUST00000210494 436 ntBASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 Gm7119-201ENSMUST00000221345 695 ntBASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 AC154738.1-201ENSMUST00000227054 368 ntBASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 Gm43130-201ENSMUST00000197721 3907 ntBASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Col6a6Q8C6K9 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms