Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm45081-201ENSMUST00000206281 572 ntBASIC6.88□□□□□ -1.31
Trim47Q8C0E3 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 AC166341.3-201ENSMUST00000221861 114 ntBASIC6.88□□□□□ -1.31
Trim47Q8C0E3 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 AC164426.1-201ENSMUST00000225745 929 ntBASIC6.88□□□□□ -1.31
Trim47Q8C0E3 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim47Q8C0E3 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Gm40020-201ENSMUST00000215677 1635 ntBASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Gm43788-201ENSMUST00000201539 2417 ntBASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.87□□□□□ -1.31
Trim47Q8C0E3 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Gm43330-201ENSMUST00000199706 2153 ntBASIC6.87□□□□□ -1.31
Trim47Q8C0E3 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Gm22021-201ENSMUST00000104353 107 ntBASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Gm13890-201ENSMUST00000117578 390 ntBASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Gm13772-201ENSMUST00000118431 317 ntBASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Gm12787-201ENSMUST00000119234 396 ntBASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Gm25384-201ENSMUST00000157807 105 ntBASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Gm23350-201ENSMUST00000158429 103 ntBASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Gm24179-201ENSMUST00000158925 127 ntBASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Gm24863-201ENSMUST00000179499 107 ntBASIC6.87□□□□□ -1.31
Trim47Q8C0E3 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Gm29519-201ENSMUST00000186994 398 ntBASIC6.87□□□□□ -1.31
Trim47Q8C0E3 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Gm20940-201ENSMUST00000197308 360 ntBASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Gm2142-201ENSMUST00000197899 589 ntBASIC6.87□□□□□ -1.31
Trim47Q8C0E3 CT025606.1-201ENSMUST00000218273 324 ntBASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Gm18405-201ENSMUST00000220743 511 ntBASIC6.87□□□□□ -1.31
Trim47Q8C0E3 AC154521.1-201ENSMUST00000222635 330 ntBASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Gm22169-201ENSMUST00000083229 107 ntBASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Gm25515-201ENSMUST00000083858 157 ntBASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Gm45520-201ENSMUST00000210109 2031 ntBASIC6.87□□□□□ -1.31
Trim47Q8C0E3 AC122263.1-201ENSMUST00000228636 2805 ntBASIC6.87□□□□□ -1.31
Trim47Q8C0E3 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim47Q8C0E3 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm44215-201ENSMUST00000204910 2711 ntBASIC6.86□□□□□ -1.31
Trim47Q8C0E3 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim47Q8C0E3 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm22371-201ENSMUST00000104588 130 ntBASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm13085-201ENSMUST00000118356 171 ntBASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm15332-201ENSMUST00000118386 357 ntBASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm14517-201ENSMUST00000119040 337 ntBASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm12396-201ENSMUST00000121600 306 ntBASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm15187-201ENSMUST00000122329 264 ntBASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm3362-201ENSMUST00000148102 466 ntBASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm27579-201ENSMUST00000158113 63 ntBASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm17366-201ENSMUST00000167629 187 ntBASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm8207-201ENSMUST00000171204 502 ntBASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm10074-201ENSMUST00000174543 249 ntBASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm27030-201ENSMUST00000182551 464 ntBASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Mir7020-201ENSMUST00000183787 70 ntBASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm27660-201ENSMUST00000184028 208 ntBASIC6.86□□□□□ -1.31
Trim47Q8C0E3 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC6.86□□□□□ -1.31
Trim47Q8C0E3 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm17934-201ENSMUST00000192818 422 ntBASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm43744-201ENSMUST00000196387 688 ntBASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm44312-201ENSMUST00000203536 469 ntBASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm45189-201ENSMUST00000208567 363 ntBASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC6.86□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms