Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Ang-ps3-201ENSMUST00000177964 433 ntBASIC7.81□□□□□ -1.16
Trim35Q8C006 Gm26501-201ENSMUST00000178307 107 ntBASIC7.81□□□□□ -1.16
Trim35Q8C006 Gm6750-201ENSMUST00000189273 268 ntBASIC7.81□□□□□ -1.16
Trim35Q8C006 Gm29739-201ENSMUST00000191760 529 ntBASIC7.81□□□□□ -1.16
Trim35Q8C006 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC7.81□□□□□ -1.16
Trim35Q8C006 Gm45478-201ENSMUST00000209472 211 ntBASIC7.81□□□□□ -1.16
Trim35Q8C006 Gm45367-201ENSMUST00000210171 347 ntBASIC7.81□□□□□ -1.16
Trim35Q8C006 AC102287.1-201ENSMUST00000211412 454 ntBASIC7.81□□□□□ -1.16
Trim35Q8C006 Gm34418-201ENSMUST00000212879 309 ntTSL 5 BASIC7.81□□□□□ -1.16
Trim35Q8C006 AC124772.1-201ENSMUST00000221325 151 ntBASIC7.81□□□□□ -1.16
Trim35Q8C006 AC091783.4-201ENSMUST00000224940 611 ntBASIC7.81□□□□□ -1.16
Trim35Q8C006 AC126805.1-201ENSMUST00000225142 262 ntBASIC7.81□□□□□ -1.16
Trim35Q8C006 AC147096.1-201ENSMUST00000227648 352 ntBASIC7.81□□□□□ -1.16
Trim35Q8C006 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim35Q8C006 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Trim35Q8C006 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Trim35Q8C006 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
Trim35Q8C006 Tgfb3-201ENSMUST00000003687 3383 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim35Q8C006 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Trim35Q8C006 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim35Q8C006 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC7.81□□□□□ -1.16
Trim35Q8C006 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim35Q8C006 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim35Q8C006 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Trim35Q8C006 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Trim35Q8C006 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim35Q8C006 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim35Q8C006 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim35Q8C006 Glra4-201ENSMUST00000018739 1831 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim35Q8C006 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim35Q8C006 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim35Q8C006 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Trim35Q8C006 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Trim35Q8C006 AC159264.1-202ENSMUST00000224856 3162 ntBASIC7.8□□□□□ -1.16
Trim35Q8C006 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC7.8□□□□□ -1.16
Trim35Q8C006 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Trim35Q8C006 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC7.8□□□□□ -1.16
Trim35Q8C006 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim35Q8C006 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Trim35Q8C006 Gm11445-201ENSMUST00000119101 532 ntBASIC7.8□□□□□ -1.16
Trim35Q8C006 Gm15497-201ENSMUST00000119137 551 ntBASIC7.8□□□□□ -1.16
Trim35Q8C006 Gm12118-201ENSMUST00000119766 532 ntBASIC7.8□□□□□ -1.16
Trim35Q8C006 Gm12727-201ENSMUST00000119885 359 ntBASIC7.8□□□□□ -1.16
Trim35Q8C006 Gm14186-201ENSMUST00000120804 137 ntBASIC7.8□□□□□ -1.16
Trim35Q8C006 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC7.8□□□□□ -1.16
Trim35Q8C006 Gm6689-201ENSMUST00000130905 481 ntBASIC7.8□□□□□ -1.16
Trim35Q8C006 Gm4660-201ENSMUST00000131499 403 ntBASIC7.8□□□□□ -1.16
Trim35Q8C006 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC7.8□□□□□ -1.16
Trim35Q8C006 Gm7582-201ENSMUST00000160831 603 ntBASIC7.8□□□□□ -1.16
Trim35Q8C006 Gm7335-201ENSMUST00000172475 373 ntBASIC7.8□□□□□ -1.16
Trim35Q8C006 Gm18797-201ENSMUST00000190809 1174 ntBASIC7.8□□□□□ -1.16
Trim35Q8C006 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim35Q8C006 Mir721-201ENSMUST00000200230 88 ntBASIC7.8□□□□□ -1.16
Trim35Q8C006 Gm44720-201ENSMUST00000206076 260 ntBASIC7.8□□□□□ -1.16
Trim35Q8C006 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC7.8□□□□□ -1.16
Trim35Q8C006 Gm44561-201ENSMUST00000208869 264 ntBASIC7.8□□□□□ -1.16
Trim35Q8C006 Gm26128-201ENSMUST00000083170 110 ntBASIC7.8□□□□□ -1.16
Trim35Q8C006 Gm7493-201ENSMUST00000085919 626 ntBASIC7.8□□□□□ -1.16
Trim35Q8C006 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim35Q8C006 2310001H17Rik-202ENSMUST00000181238 2237 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim35Q8C006 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim35Q8C006 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim35Q8C006 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim35Q8C006 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim35Q8C006 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim35Q8C006 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim35Q8C006 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim35Q8C006 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC7.8□□□□□ -1.16
Trim35Q8C006 Wdr27-206ENSMUST00000228330 2759 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Trim35Q8C006 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim35Q8C006 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Trim35Q8C006 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Trim35Q8C006 Casp8-202ENSMUST00000165549 1917 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim35Q8C006 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim35Q8C006 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim35Q8C006 Gm45160-201ENSMUST00000207112 3099 ntBASIC7.8□□□□□ -1.16
Trim35Q8C006 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim35Q8C006 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim35Q8C006 Gm18305-201ENSMUST00000216532 2128 ntBASIC7.79□□□□□ -1.16
Trim35Q8C006 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Trim35Q8C006 Gm43769-201ENSMUST00000201871 4323 ntBASIC7.79□□□□□ -1.16
Trim35Q8C006 Gm37268-201ENSMUST00000192254 2614 ntBASIC7.79□□□□□ -1.16
Trim35Q8C006 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim35Q8C006 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
Trim35Q8C006 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim35Q8C006 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Trim35Q8C006 Gm24472-201ENSMUST00000104484 132 ntBASIC7.79□□□□□ -1.16
Trim35Q8C006 Gm14923-201ENSMUST00000118270 155 ntBASIC7.79□□□□□ -1.16
Trim35Q8C006 Gm15244-201ENSMUST00000121122 130 ntBASIC7.79□□□□□ -1.16
Trim35Q8C006 Gm14170-201ENSMUST00000133751 331 ntTSL 3 BASIC7.79□□□□□ -1.16
Trim35Q8C006 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC7.79□□□□□ -1.16
Trim35Q8C006 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim35Q8C006 Gm23584-201ENSMUST00000157655 129 ntBASIC7.79□□□□□ -1.16
Trim35Q8C006 Gm26408-201ENSMUST00000157672 127 ntBASIC7.79□□□□□ -1.16
Trim35Q8C006 Gm25863-201ENSMUST00000158249 329 ntBASIC7.79□□□□□ -1.16
Trim35Q8C006 Gm25444-201ENSMUST00000158999 113 ntBASIC7.79□□□□□ -1.16
Trim35Q8C006 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim35Q8C006 Gm20485-201ENSMUST00000174452 394 ntTSL 2 BASIC7.79□□□□□ -1.16
Trim35Q8C006 Gm22367-201ENSMUST00000178930 132 ntBASIC7.79□□□□□ -1.16
Trim35Q8C006 Gm25450-201ENSMUST00000179144 107 ntBASIC7.79□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms