Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm10727-201ENSMUST00000197107 1602 ntBASIC6.96□□□□□ -1.3
Usp40Q8BWR4 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC6.96□□□□□ -1.3
Usp40Q8BWR4 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Usp40Q8BWR4 AC164092.3-201ENSMUST00000216970 1323 ntBASIC6.96□□□□□ -1.3
Usp40Q8BWR4 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Usp40Q8BWR4 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Usp40Q8BWR4 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Usp40Q8BWR4 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Usp40Q8BWR4 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Usp40Q8BWR4 CT025675.1-201ENSMUST00000228171 1567 ntBASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Gm37551-201ENSMUST00000195556 2861 ntBASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Gm43953-201ENSMUST00000203709 2867 ntBASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Gm37087-201ENSMUST00000192966 3309 ntBASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Gm37752-201ENSMUST00000193494 3309 ntBASIC6.95□□□□□ -1.3
Usp40Q8BWR4 AC139218.1-201ENSMUST00000228215 4287 ntBASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Gm22899-201ENSMUST00000104540 131 ntBASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Gm7840-201ENSMUST00000122086 533 ntBASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Gm24628-201ENSMUST00000122761 289 ntBASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Gm23467-201ENSMUST00000157127 159 ntBASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Gm22836-201ENSMUST00000158441 61 ntBASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Gm22254-201ENSMUST00000179186 110 ntBASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Mir7028-201ENSMUST00000185016 64 ntBASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Gm28414-201ENSMUST00000190111 294 ntBASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Gm2077-201ENSMUST00000195017 319 ntBASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Gm38221-201ENSMUST00000195146 365 ntBASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Gm17967-201ENSMUST00000195319 647 ntBASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Gm42818-201ENSMUST00000198869 987 ntBASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Gm42581-201ENSMUST00000201774 966 ntBASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Usp40Q8BWR4 AC109180.1-201ENSMUST00000218676 398 ntBASIC6.95□□□□□ -1.3
Usp40Q8BWR4 AC158803.3-201ENSMUST00000220024 211 ntBASIC6.95□□□□□ -1.3
Usp40Q8BWR4 AC121599.1-201ENSMUST00000224276 449 ntBASIC6.95□□□□□ -1.3
Usp40Q8BWR4 CT030238.4-201ENSMUST00000228579 801 ntBASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Gm7099-201ENSMUST00000080066 554 ntBASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Usp40Q8BWR4 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Gm44751-201ENSMUST00000208302 4387 ntBASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC6.95□□□□□ -1.3
Usp40Q8BWR4 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Usp40Q8BWR4 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Mir582-201ENSMUST00000103758 81 ntBASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Gm24835-201ENSMUST00000116777 111 ntBASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Gm14985-201ENSMUST00000118693 786 ntBASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Gm11196-201ENSMUST00000119052 395 ntBASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Gm11410-201ENSMUST00000120053 1143 ntBASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Gm13080-201ENSMUST00000120556 420 ntBASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Gm22186-201ENSMUST00000157822 122 ntBASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Gm21894-201ENSMUST00000179631 546 ntBASIC6.94□□□□□ -1.3
Usp40Q8BWR4 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Gm37889-201ENSMUST00000194174 251 ntBASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Gm37908-201ENSMUST00000195828 470 ntBASIC6.94□□□□□ -1.3
Usp40Q8BWR4 AC174780.1-201ENSMUST00000199415 1107 ntBASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC6.94□□□□□ -1.3
Usp40Q8BWR4 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Gm9973-202ENSMUST00000220926 166 ntBASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Gm5045-201ENSMUST00000027054 810 ntBASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Usp40Q8BWR4 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms