Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm44003-201ENSMUST00000203024 490 ntBASIC5.07□□□□□ -1.6
NcanP55066 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NcanP55066 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC5.07□□□□□ -1.6
NcanP55066 Gm45171-201ENSMUST00000206360 736 ntBASIC5.07□□□□□ -1.6
NcanP55066 Gm4574-201ENSMUST00000207804 542 ntBASIC5.07□□□□□ -1.6
NcanP55066 Olfr1309-201ENSMUST00000207885 964 ntBASIC5.07□□□□□ -1.6
NcanP55066 Gnrh1-202ENSMUST00000223929 428 ntBASIC5.07□□□□□ -1.6
NcanP55066 AC165437.1-201ENSMUST00000228640 536 ntBASIC5.07□□□□□ -1.6
NcanP55066 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
NcanP55066 Gm25140-201ENSMUST00000083254 140 ntBASIC5.07□□□□□ -1.6
NcanP55066 Mir26a-2-201ENSMUST00000083496 84 ntBASIC5.07□□□□□ -1.6
NcanP55066 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NcanP55066 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NcanP55066 Gm37311-201ENSMUST00000195541 2024 ntBASIC5.07□□□□□ -1.6
NcanP55066 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
NcanP55066 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NcanP55066 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NcanP55066 Gm13712-201ENSMUST00000117484 2295 ntBASIC5.07□□□□□ -1.6
NcanP55066 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
NcanP55066 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NcanP55066 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NcanP55066 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
NcanP55066 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.06□□□□□ -1.6
NcanP55066 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
NcanP55066 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.06□□□□□ -1.6
NcanP55066 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
NcanP55066 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC5.06□□□□□ -1.6
NcanP55066 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NcanP55066 Gm38264-201ENSMUST00000194850 2032 ntBASIC5.06□□□□□ -1.6
NcanP55066 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.06□□□□□ -1.6
NcanP55066 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.06□□□□□ -1.6
NcanP55066 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
NcanP55066 Gm24142-201ENSMUST00000101960 107 ntBASIC5.06□□□□□ -1.6
NcanP55066 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC5.06□□□□□ -1.6
NcanP55066 Gm13506-201ENSMUST00000120391 1083 ntBASIC5.06□□□□□ -1.6
NcanP55066 Gm16463-201ENSMUST00000120527 721 ntBASIC5.06□□□□□ -1.6
NcanP55066 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC5.06□□□□□ -1.6
NcanP55066 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC5.06□□□□□ -1.6
NcanP55066 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC5.06□□□□□ -1.6
NcanP55066 Gm24939-201ENSMUST00000158325 137 ntBASIC5.06□□□□□ -1.6
NcanP55066 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NcanP55066 Gm25197-201ENSMUST00000175516 126 ntBASIC5.06□□□□□ -1.6
NcanP55066 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NcanP55066 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NcanP55066 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NcanP55066 Gm19196-201ENSMUST00000209258 357 ntBASIC5.06□□□□□ -1.6
NcanP55066 Gm18193-201ENSMUST00000210017 772 ntBASIC5.06□□□□□ -1.6
NcanP55066 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
NcanP55066 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NcanP55066 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NcanP55066 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NcanP55066 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NcanP55066 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NcanP55066 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
NcanP55066 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NcanP55066 Gm43319-201ENSMUST00000198036 2270 ntBASIC5.06□□□□□ -1.6
NcanP55066 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NcanP55066 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NcanP55066 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
NcanP55066 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
NcanP55066 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
NcanP55066 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NcanP55066 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
NcanP55066 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
NcanP55066 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NcanP55066 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NcanP55066 Gm9427-201ENSMUST00000116187 651 ntBASIC5.05□□□□□ -1.6
NcanP55066 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC5.05□□□□□ -1.6
NcanP55066 Gm15058-201ENSMUST00000117689 458 ntBASIC5.05□□□□□ -1.6
NcanP55066 Gm14082-201ENSMUST00000118582 801 ntBASIC5.05□□□□□ -1.6
NcanP55066 Gm14560-201ENSMUST00000118672 375 ntBASIC5.05□□□□□ -1.6
NcanP55066 Gm3757-201ENSMUST00000125878 675 ntBASIC5.05□□□□□ -1.6
NcanP55066 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC5.05□□□□□ -1.6
NcanP55066 Gm23554-201ENSMUST00000157818 110 ntBASIC5.05□□□□□ -1.6
NcanP55066 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
NcanP55066 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC5.05□□□□□ -1.6
NcanP55066 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NcanP55066 Gm19774-201ENSMUST00000190667 114 ntBASIC5.05□□□□□ -1.6
NcanP55066 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NcanP55066 Gm38270-201ENSMUST00000192721 407 ntBASIC5.05□□□□□ -1.6
NcanP55066 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.05□□□□□ -1.6
NcanP55066 Gm5660-201ENSMUST00000197453 1149 ntBASIC5.05□□□□□ -1.6
NcanP55066 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NcanP55066 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.05□□□□□ -1.6
NcanP55066 AC153526.4-201ENSMUST00000217713 379 ntBASIC5.05□□□□□ -1.6
NcanP55066 Gm5548-201ENSMUST00000055878 397 ntBASIC5.05□□□□□ -1.6
NcanP55066 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NcanP55066 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NcanP55066 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NcanP55066 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.05□□□□□ -1.6
NcanP55066 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.05□□□□□ -1.6
NcanP55066 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NcanP55066 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC5.05□□□□□ -1.6
NcanP55066 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
NcanP55066 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
NcanP55066 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.05□□□□□ -1.6
NcanP55066 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.05□□□□□ -1.6
NcanP55066 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NcanP55066 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NcanP55066 Gm37412-201ENSMUST00000194866 4321 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms