Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Pcdhb3Q91XZ7 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Gm43891-201ENSMUST00000205132 3112 ntBASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Gm37760-201ENSMUST00000194726 3841 ntBASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Gm22671-201ENSMUST00000104420 134 ntBASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Gm12040-201ENSMUST00000118357 537 ntBASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Gm14049-201ENSMUST00000121009 636 ntBASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Gm23213-201ENSMUST00000122715 313 ntBASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Gm23169-201ENSMUST00000157157 112 ntBASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Gm26102-201ENSMUST00000157251 284 ntBASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Gm8715-201ENSMUST00000162728 531 ntBASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Gm17062-201ENSMUST00000166987 461 ntBASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Gm5787-201ENSMUST00000183049 1038 ntBASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Gm28717-201ENSMUST00000189950 315 ntBASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Gm42776-201ENSMUST00000198031 406 ntBASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Gm3010-201ENSMUST00000198805 448 ntBASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Gm7838-201ENSMUST00000203221 1189 ntBASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 AC138765.1-201ENSMUST00000228657 385 ntBASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 AC155167.1-201ENSMUST00000228931 614 ntBASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Gm44584-201ENSMUST00000208395 2880 ntBASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC6.72□□□□□ -1.33
Pcdhb3Q91XZ7 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Pcdhb3Q91XZ7 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Pcdhb3Q91XZ7 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Pcdhb3Q91XZ7 CT030170.3-201ENSMUST00000221205 1815 ntBASIC6.71□□□□□ -1.33
Pcdhb3Q91XZ7 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC6.71□□□□□ -1.33
Pcdhb3Q91XZ7 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Pcdhb3Q91XZ7 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Pcdhb3Q91XZ7 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Pcdhb3Q91XZ7 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Pcdhb3Q91XZ7 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 Gm43496-201ENSMUST00000201682 3001 ntBASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 Gm15203-201ENSMUST00000117668 455 ntBASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 Gm12677-201ENSMUST00000118668 426 ntBASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 Gm10913-201ENSMUST00000133732 463 ntBASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 Gm23077-201ENSMUST00000157854 116 ntBASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 Gm2976-201ENSMUST00000160362 513 ntBASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 Gm26430-201ENSMUST00000178054 107 ntBASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 Gm25939-201ENSMUST00000179876 191 ntBASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 Gm26180-201ENSMUST00000179942 107 ntBASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 Gm2367-201ENSMUST00000192374 472 ntBASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 Gm38079-201ENSMUST00000195603 154 ntBASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 Gm8929-201ENSMUST00000197781 1132 ntBASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 Gm17989-201ENSMUST00000211543 412 ntBASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Pcdhb3Q91XZ7 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms