Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Gm37205-201ENSMUST00000194820 2736 ntBASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Gm12231-201ENSMUST00000119447 695 ntBASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Gm12577-201ENSMUST00000119701 574 ntBASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Gm13815-201ENSMUST00000119963 412 ntBASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Scarna6-201ENSMUST00000158656 265 ntBASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Gm16566-201ENSMUST00000160387 910 ntBASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Gm17086-201ENSMUST00000171346 484 ntBASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Gm20428-201ENSMUST00000174365 283 ntBASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Gm22355-201ENSMUST00000175531 96 ntBASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Gm43037-201ENSMUST00000196808 250 ntBASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Gm43309-201ENSMUST00000200837 458 ntBASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Gm45610-201ENSMUST00000209227 784 ntBASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 AC151907.1-201ENSMUST00000228812 412 ntBASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Snora52-201ENSMUST00000082732 137 ntBASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC4.88□□□□□ -1.63
Prpf39Q8K2Z2 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Gm18189-201ENSMUST00000218153 1951 ntBASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Gm23746-201ENSMUST00000104229 125 ntBASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Gm14909-201ENSMUST00000117853 351 ntBASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Gm11584-201ENSMUST00000120636 325 ntBASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Gm12880-201ENSMUST00000120652 494 ntBASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Gm13149-201ENSMUST00000122071 339 ntBASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Gm7840-201ENSMUST00000122086 533 ntBASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Gm25106-201ENSMUST00000122672 134 ntBASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Gm3160-201ENSMUST00000128343 607 ntBASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Gm17421-201ENSMUST00000167845 674 ntBASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Gm5558-201ENSMUST00000178933 495 ntBASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Gm37684-201ENSMUST00000192779 355 ntBASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Gm43524-201ENSMUST00000197278 298 ntBASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Gm43144-201ENSMUST00000198256 485 ntBASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Gm45608-201ENSMUST00000210948 389 ntBASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 AC153801.1-201ENSMUST00000217904 947 ntBASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Gm18387-201ENSMUST00000220333 702 ntBASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 AC096628.1-201ENSMUST00000226060 641 ntBASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 AC098742.1-201ENSMUST00000227945 373 ntBASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Gm6065-201ENSMUST00000081336 492 ntBASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Gm6043-201ENSMUST00000099961 492 ntBASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Prpf39Q8K2Z2 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms