Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm13756-201ENSMUST00000117618 222 ntBASIC7.83□□□□□ -1.16
Trim35Q8C006 Gm15029-201ENSMUST00000119742 199 ntBASIC7.83□□□□□ -1.16
Trim35Q8C006 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC7.83□□□□□ -1.16
Trim35Q8C006 Gm23232-201ENSMUST00000157300 105 ntBASIC7.83□□□□□ -1.16
Trim35Q8C006 Mir1966-201ENSMUST00000158807 108 ntBASIC7.83□□□□□ -1.16
Trim35Q8C006 Gm4246-201ENSMUST00000172822 216 ntBASIC7.83□□□□□ -1.16
Trim35Q8C006 Mir3060-201ENSMUST00000175339 83 ntBASIC7.83□□□□□ -1.16
Trim35Q8C006 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC7.83□□□□□ -1.16
Trim35Q8C006 Gm26097-201ENSMUST00000179642 93 ntBASIC7.83□□□□□ -1.16
Trim35Q8C006 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC7.83□□□□□ -1.16
Trim35Q8C006 Gm28163-201ENSMUST00000187099 325 ntBASIC7.83□□□□□ -1.16
Trim35Q8C006 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC7.83□□□□□ -1.16
Trim35Q8C006 Gm43418-201ENSMUST00000201334 428 ntBASIC7.83□□□□□ -1.16
Trim35Q8C006 Gm44427-201ENSMUST00000204123 456 ntTSL 3 BASIC7.83□□□□□ -1.16
Trim35Q8C006 Gm18007-201ENSMUST00000205019 844 ntBASIC7.83□□□□□ -1.16
Trim35Q8C006 Gm45403-201ENSMUST00000209453 276 ntBASIC7.83□□□□□ -1.16
Trim35Q8C006 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC7.83□□□□□ -1.16
Trim35Q8C006 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC7.83□□□□□ -1.16
Trim35Q8C006 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC7.83□□□□□ -1.16
Trim35Q8C006 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Trim35Q8C006 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Trim35Q8C006 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Trim35Q8C006 Lrrc18-201ENSMUST00000038956 2587 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
Trim35Q8C006 Pax9-201ENSMUST00000001538 4166 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Trim35Q8C006 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC7.83□□□□□ -1.16
Trim35Q8C006 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Trim35Q8C006 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Trim35Q8C006 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Trim35Q8C006 Gm38178-201ENSMUST00000194502 2471 ntBASIC7.83□□□□□ -1.16
Trim35Q8C006 Zim1-202ENSMUST00000122432 3060 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim35Q8C006 Rapgef4-202ENSMUST00000090826 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim35Q8C006 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim35Q8C006 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim35Q8C006 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim35Q8C006 AC125223.3-201ENSMUST00000223588 2067 ntBASIC7.82□□□□□ -1.16
Trim35Q8C006 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim35Q8C006 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC7.82□□□□□ -1.16
Trim35Q8C006 Ighj1-201ENSMUST00000103430 53 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Trim35Q8C006 Gm23946-201ENSMUST00000104423 197 ntBASIC7.82□□□□□ -1.16
Trim35Q8C006 Gm14099-201ENSMUST00000117769 605 ntBASIC7.82□□□□□ -1.16
Trim35Q8C006 Gm14930-201ENSMUST00000118864 652 ntBASIC7.82□□□□□ -1.16
Trim35Q8C006 Gm4912-201ENSMUST00000122212 1044 ntBASIC7.82□□□□□ -1.16
Trim35Q8C006 Gm25845-201ENSMUST00000122588 310 ntBASIC7.82□□□□□ -1.16
Trim35Q8C006 BC064078-201ENSMUST00000122939 570 ntBASIC7.82□□□□□ -1.16
Trim35Q8C006 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC7.82□□□□□ -1.16
Trim35Q8C006 Gm24916-201ENSMUST00000157287 79 ntBASIC7.82□□□□□ -1.16
Trim35Q8C006 Gm24666-201ENSMUST00000158937 167 ntBASIC7.82□□□□□ -1.16
Trim35Q8C006 Dxo-208ENSMUST00000174092 738 ntTSL 5 BASIC7.82□□□□□ -1.16
Trim35Q8C006 Gm26197-201ENSMUST00000175033 115 ntBASIC7.82□□□□□ -1.16
Trim35Q8C006 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Trim35Q8C006 Gm8357-201ENSMUST00000181115 1011 ntBASIC7.82□□□□□ -1.16
Trim35Q8C006 Mir6999-201ENSMUST00000183498 61 ntBASIC7.82□□□□□ -1.16
Trim35Q8C006 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC7.82□□□□□ -1.16
Trim35Q8C006 Gm8407-201ENSMUST00000192719 427 ntBASIC7.82□□□□□ -1.16
Trim35Q8C006 Gm8896-201ENSMUST00000197434 1106 ntBASIC7.82□□□□□ -1.16
Trim35Q8C006 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC7.82□□□□□ -1.16
Trim35Q8C006 Gm45534-201ENSMUST00000211449 2339 ntBASIC7.82□□□□□ -1.16
Trim35Q8C006 Gm30674-201ENSMUST00000214523 392 ntBASIC7.82□□□□□ -1.16
Trim35Q8C006 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Trim35Q8C006 Gm36862-202ENSMUST00000222758 1051 ntTSL 5 BASIC7.82□□□□□ -1.16
Trim35Q8C006 Gm7086-202ENSMUST00000228849 506 ntBASIC7.82□□□□□ -1.16
Trim35Q8C006 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim35Q8C006 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim35Q8C006 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim35Q8C006 Gm22293-201ENSMUST00000083314 109 ntBASIC7.82□□□□□ -1.16
Trim35Q8C006 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Trim35Q8C006 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Trim35Q8C006 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC7.82□□□□□ -1.16
Trim35Q8C006 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC7.82□□□□□ -1.16
Trim35Q8C006 Gc-201ENSMUST00000049209 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim35Q8C006 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC7.82□□□□□ -1.16
Trim35Q8C006 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Trim35Q8C006 Sema3d-205ENSMUST00000197927 3207 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Trim35Q8C006 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim35Q8C006 Gm15413-201ENSMUST00000155101 1935 ntTSL 2 BASIC7.82□□□□□ -1.16
Trim35Q8C006 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Trim35Q8C006 9230112J17Rik-201ENSMUST00000216749 2333 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Trim35Q8C006 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim35Q8C006 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Trim35Q8C006 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim35Q8C006 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Trim35Q8C006 Gm37403-201ENSMUST00000193775 3521 ntBASIC7.81□□□□□ -1.16
Trim35Q8C006 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim35Q8C006 Gm8204-201ENSMUST00000185696 2144 ntBASIC7.81□□□□□ -1.16
Trim35Q8C006 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim35Q8C006 AC129208.1-201ENSMUST00000227474 2906 ntBASIC7.81□□□□□ -1.16
Trim35Q8C006 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Trim35Q8C006 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
Trim35Q8C006 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC7.81□□□□□ -1.16
Trim35Q8C006 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim35Q8C006 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Trim35Q8C006 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Trim35Q8C006 Gm24987-201ENSMUST00000104453 134 ntBASIC7.81□□□□□ -1.16
Trim35Q8C006 Gm2066-201ENSMUST00000118046 389 ntBASIC7.81□□□□□ -1.16
Trim35Q8C006 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Trim35Q8C006 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC7.81□□□□□ -1.16
Trim35Q8C006 Gm5958-201ENSMUST00000147698 297 ntBASIC7.81□□□□□ -1.16
Trim35Q8C006 Gm22562-201ENSMUST00000157334 111 ntBASIC7.81□□□□□ -1.16
Trim35Q8C006 Gm26351-201ENSMUST00000157532 232 ntBASIC7.81□□□□□ -1.16
Trim35Q8C006 Mir3112-201ENSMUST00000175431 82 ntBASIC7.81□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 96.7 ms