Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
Upf3bQ3ULL6 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Upf3bQ3ULL6 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.78□□□□□ -1.64
Upf3bQ3ULL6 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Upf3bQ3ULL6 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Upf3bQ3ULL6 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Upf3bQ3ULL6 Gm14878-201ENSMUST00000118167 293 ntBASIC4.78□□□□□ -1.64
Upf3bQ3ULL6 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.78□□□□□ -1.64
Upf3bQ3ULL6 Gm3077-201ENSMUST00000165903 627 ntBASIC4.78□□□□□ -1.64
Upf3bQ3ULL6 Gm27457-201ENSMUST00000184771 156 ntBASIC4.78□□□□□ -1.64
Upf3bQ3ULL6 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Upf3bQ3ULL6 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Upf3bQ3ULL6 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC4.78□□□□□ -1.64
Upf3bQ3ULL6 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC4.78□□□□□ -1.64
Upf3bQ3ULL6 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Upf3bQ3ULL6 Gm18306-201ENSMUST00000207338 569 ntBASIC4.78□□□□□ -1.64
Upf3bQ3ULL6 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC4.78□□□□□ -1.64
Upf3bQ3ULL6 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
Upf3bQ3ULL6 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Upf3bQ3ULL6 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
Upf3bQ3ULL6 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
Upf3bQ3ULL6 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Upf3bQ3ULL6 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Upf3bQ3ULL6 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Upf3bQ3ULL6 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 Gm25278-201ENSMUST00000157267 120 ntBASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 Gm23902-201ENSMUST00000157571 134 ntBASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 Gm24636-201ENSMUST00000158673 288 ntBASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 Gm16545-201ENSMUST00000161968 463 ntBASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 Gm4842-201ENSMUST00000183237 835 ntBASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 Mir6410-201ENSMUST00000184204 104 ntBASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 Gm27568-201ENSMUST00000184220 99 ntBASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 Gm2950-201ENSMUST00000185530 520 ntBASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 Gm28830-201ENSMUST00000188192 213 ntBASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 Gm17953-201ENSMUST00000192061 667 ntBASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 Gm37720-201ENSMUST00000195497 1241 ntBASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 Gm6366-201ENSMUST00000198766 826 ntBASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 Gm44604-201ENSMUST00000205475 496 ntBASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 Gm33626-201ENSMUST00000206790 828 ntBASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 Gm46190-201ENSMUST00000219650 427 ntBASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 Gm22350-201ENSMUST00000083924 156 ntBASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Upf3bQ3ULL6 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Gm14576-201ENSMUST00000118073 1111 ntBASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Gm12571-201ENSMUST00000118132 243 ntBASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Gm12466-201ENSMUST00000121199 620 ntBASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Gm25665-201ENSMUST00000157695 110 ntBASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Gm28118-201ENSMUST00000185957 294 ntBASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Gm28116-201ENSMUST00000189064 387 ntBASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Gm37601-201ENSMUST00000194922 394 ntBASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Gm43304-201ENSMUST00000196803 326 ntBASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 AC174780.1-201ENSMUST00000199415 1107 ntBASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Gm24207-201ENSMUST00000082781 108 ntBASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Gm25099-201ENSMUST00000093716 116 ntBASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 AC102847.2-201ENSMUST00000227799 2906 ntBASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
Upf3bQ3ULL6 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.75□□□□□ -1.65
Upf3bQ3ULL6 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms