Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Sox1P53783 Gm42658-201ENSMUST00000197199 1575 ntBASIC6.15□□□□□ -1.42
Sox1P53783 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.15□□□□□ -1.42
Sox1P53783 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sox1P53783 Gm44186-201ENSMUST00000204118 2752 ntBASIC6.15□□□□□ -1.42
Sox1P53783 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.15□□□□□ -1.42
Sox1P53783 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sox1P53783 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sox1P53783 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sox1P53783 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC6.15□□□□□ -1.42
Sox1P53783 Gm10855-201ENSMUST00000100426 2541 ntBASIC6.15□□□□□ -1.42
Sox1P53783 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Sox1P53783 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Sox1P53783 Gm13259-201ENSMUST00000120792 456 ntBASIC6.15□□□□□ -1.42
Sox1P53783 Gm15096-201ENSMUST00000121918 878 ntBASIC6.15□□□□□ -1.42
Sox1P53783 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC6.15□□□□□ -1.42
Sox1P53783 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC6.15□□□□□ -1.42
Sox1P53783 Gm22236-201ENSMUST00000157093 106 ntBASIC6.15□□□□□ -1.42
Sox1P53783 Gm22789-201ENSMUST00000157884 130 ntBASIC6.15□□□□□ -1.42
Sox1P53783 Gm8338-201ENSMUST00000163928 363 ntBASIC6.15□□□□□ -1.42
Sox1P53783 Fth-ps2-201ENSMUST00000168364 516 ntBASIC6.15□□□□□ -1.42
Sox1P53783 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sox1P53783 Gm23003-201ENSMUST00000179948 107 ntBASIC6.15□□□□□ -1.42
Sox1P53783 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC6.15□□□□□ -1.42
Sox1P53783 Gm28151-201ENSMUST00000189404 951 ntBASIC6.15□□□□□ -1.42
Sox1P53783 Gm28404-201ENSMUST00000190242 453 ntBASIC6.15□□□□□ -1.42
Sox1P53783 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC6.15□□□□□ -1.42
Sox1P53783 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC6.15□□□□□ -1.42
Sox1P53783 Gm22897-202ENSMUST00000197782 127 ntBASIC6.15□□□□□ -1.42
Sox1P53783 Gm9710-201ENSMUST00000198053 499 ntBASIC6.15□□□□□ -1.42
Sox1P53783 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC6.15□□□□□ -1.42
Sox1P53783 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC6.15□□□□□ -1.42
Sox1P53783 AC101984.1-201ENSMUST00000219639 402 ntBASIC6.15□□□□□ -1.42
Sox1P53783 AC164618.1-201ENSMUST00000225769 592 ntBASIC6.15□□□□□ -1.42
Sox1P53783 AC125539.2-201ENSMUST00000228339 753 ntBASIC6.15□□□□□ -1.42
Sox1P53783 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sox1P53783 Snord15b-201ENSMUST00000083032 145 ntBASIC6.15□□□□□ -1.42
Sox1P53783 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC6.15□□□□□ -1.42
Sox1P53783 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sox1P53783 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Sox1P53783 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Sox1P53783 Gm43190-201ENSMUST00000187850 1779 ntBASIC6.15□□□□□ -1.43
Sox1P53783 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC6.15□□□□□ -1.43
Sox1P53783 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Sox1P53783 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Sox1P53783 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Sox1P53783 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Sox1P53783 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
Sox1P53783 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Sox1P53783 Gm14988-201ENSMUST00000117224 1548 ntBASIC6.15□□□□□ -1.43
Sox1P53783 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Sox1P53783 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox1P53783 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox1P53783 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox1P53783 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox1P53783 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox1P53783 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox1P53783 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Sox1P53783 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox1P53783 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Sox1P53783 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Sox1P53783 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Sox1P53783 Gm14534-201ENSMUST00000120045 357 ntBASIC6.14□□□□□ -1.43
Sox1P53783 Gm14867-201ENSMUST00000120156 866 ntBASIC6.14□□□□□ -1.43
Sox1P53783 Gm14392-201ENSMUST00000120332 401 ntBASIC6.14□□□□□ -1.43
Sox1P53783 Gm12308-201ENSMUST00000120440 389 ntBASIC6.14□□□□□ -1.43
Sox1P53783 Gm12399-201ENSMUST00000121475 446 ntBASIC6.14□□□□□ -1.43
Sox1P53783 Gm23583-201ENSMUST00000158533 289 ntBASIC6.14□□□□□ -1.43
Sox1P53783 Gm23774-201ENSMUST00000158990 131 ntBASIC6.14□□□□□ -1.43
Sox1P53783 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC6.14□□□□□ -1.43
Sox1P53783 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC6.14□□□□□ -1.43
Sox1P53783 Gm20701-201ENSMUST00000176082 347 ntBASIC6.14□□□□□ -1.43
Sox1P53783 Gm5527-201ENSMUST00000179821 642 ntBASIC6.14□□□□□ -1.43
Sox1P53783 Mir6541-201ENSMUST00000183649 110 ntBASIC6.14□□□□□ -1.43
Sox1P53783 Gm28094-201ENSMUST00000185262 390 ntBASIC6.14□□□□□ -1.43
Sox1P53783 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox1P53783 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC6.14□□□□□ -1.43
Sox1P53783 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox1P53783 Gm8041-201ENSMUST00000199755 616 ntBASIC6.14□□□□□ -1.43
Sox1P53783 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC6.14□□□□□ -1.43
Sox1P53783 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC6.14□□□□□ -1.43
Sox1P53783 Gm44149-201ENSMUST00000204256 226 ntBASIC6.14□□□□□ -1.43
Sox1P53783 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC6.14□□□□□ -1.43
Sox1P53783 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox1P53783 Gm18903-201ENSMUST00000215343 480 ntBASIC6.14□□□□□ -1.43
Sox1P53783 CT030704.1-201ENSMUST00000227521 699 ntBASIC6.14□□□□□ -1.43
Sox1P53783 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Sox1P53783 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox1P53783 n-R5s94-201ENSMUST00000082573 119 ntBASIC6.14□□□□□ -1.43
Sox1P53783 Gm24200-201ENSMUST00000082955 157 ntBASIC6.14□□□□□ -1.43
Sox1P53783 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox1P53783 Mir484-201ENSMUST00000093566 67 ntBASIC6.14□□□□□ -1.43
Sox1P53783 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox1P53783 Gm37311-201ENSMUST00000195541 2024 ntBASIC6.14□□□□□ -1.43
Sox1P53783 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox1P53783 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox1P53783 Gm15095-201ENSMUST00000118996 1430 ntBASIC6.14□□□□□ -1.43
Sox1P53783 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox1P53783 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC6.14□□□□□ -1.43
Sox1P53783 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms