Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 Gm2628-201ENSMUST00000218019 426 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 Gm46996-201ENSMUST00000220924 408 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 AC140451.2-202ENSMUST00000226156 574 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 AC113031.1-201ENSMUST00000227400 432 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 Gm23614-201ENSMUST00000082598 107 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Rfx1P48377 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Rfx1P48377 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Rfx1P48377 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Rfx1P48377 Gm42798-201ENSMUST00000200853 3972 ntBASIC6.84□□□□□ -1.31
Rfx1P48377 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Rfx1P48377 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Rfx1P48377 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Rfx1P48377 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Rfx1P48377 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
Rfx1P48377 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.32
Rfx1P48377 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
Rfx1P48377 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC6.83□□□□□ -1.32
Rfx1P48377 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
Rfx1P48377 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC6.83□□□□□ -1.32
Rfx1P48377 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Rfx1P48377 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Rfx1P48377 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Rfx1P48377 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Rfx1P48377 Gm8750-201ENSMUST00000173278 1537 ntBASIC6.83□□□□□ -1.32
Rfx1P48377 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.83□□□□□ -1.32
Rfx1P48377 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Rfx1P48377 Gm11488-201ENSMUST00000117277 863 ntBASIC6.83□□□□□ -1.32
Rfx1P48377 Gm11561-201ENSMUST00000117429 417 ntBASIC6.83□□□□□ -1.32
Rfx1P48377 Gm13803-201ENSMUST00000117547 489 ntBASIC6.83□□□□□ -1.32
Rfx1P48377 Gm13176-201ENSMUST00000117910 477 ntBASIC6.83□□□□□ -1.32
Rfx1P48377 Gm13677-201ENSMUST00000120739 595 ntBASIC6.83□□□□□ -1.32
Rfx1P48377 Gm5843-201ENSMUST00000121631 476 ntBASIC6.83□□□□□ -1.32
Rfx1P48377 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Rfx1P48377 Gm25826-201ENSMUST00000157090 137 ntBASIC6.83□□□□□ -1.32
Rfx1P48377 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Rfx1P48377 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC6.83□□□□□ -1.32
Rfx1P48377 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC6.83□□□□□ -1.32
Rfx1P48377 Gm22166-201ENSMUST00000178419 121 ntBASIC6.83□□□□□ -1.32
Rfx1P48377 Gm23288-201ENSMUST00000179213 121 ntBASIC6.83□□□□□ -1.32
Rfx1P48377 Gm25873-201ENSMUST00000180317 107 ntBASIC6.83□□□□□ -1.32
Rfx1P48377 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC6.83□□□□□ -1.32
Rfx1P48377 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC6.83□□□□□ -1.32
Rfx1P48377 Scgb2b33-201ENSMUST00000187413 334 ntBASIC6.83□□□□□ -1.32
Rfx1P48377 Gm18444-201ENSMUST00000191239 629 ntBASIC6.83□□□□□ -1.32
Rfx1P48377 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Rfx1P48377 Gm44219-201ENSMUST00000203005 273 ntBASIC6.83□□□□□ -1.32
Rfx1P48377 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC6.83□□□□□ -1.32
Rfx1P48377 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.83□□□□□ -1.32
Rfx1P48377 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Rfx1P48377 Gm35262-201ENSMUST00000215133 267 ntBASIC6.83□□□□□ -1.32
Rfx1P48377 AC102369.1-201ENSMUST00000218415 373 ntBASIC6.83□□□□□ -1.32
Rfx1P48377 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC6.83□□□□□ -1.32
Rfx1P48377 AC156559.1-201ENSMUST00000224158 222 ntBASIC6.83□□□□□ -1.32
Rfx1P48377 AL606513.1-201ENSMUST00000225369 579 ntBASIC6.83□□□□□ -1.32
Rfx1P48377 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Rfx1P48377 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Rfx1P48377 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Rfx1P48377 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
Rfx1P48377 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Rfx1P48377 Gm14442-201ENSMUST00000119690 1736 ntBASIC6.83□□□□□ -1.32
Rfx1P48377 Gm43361-201ENSMUST00000196562 4690 ntBASIC6.83□□□□□ -1.32
Rfx1P48377 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Rfx1P48377 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Rfx1P48377 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Rfx1P48377 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Rfx1P48377 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Rfx1P48377 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Rfx1P48377 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.83□□□□□ -1.32
Rfx1P48377 Gm7709-201ENSMUST00000199391 1858 ntBASIC6.83□□□□□ -1.32
Rfx1P48377 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Rfx1P48377 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC6.83□□□□□ -1.32
Rfx1P48377 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Rfx1P48377 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Rfx1P48377 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Rfx1P48377 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Rfx1P48377 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Rfx1P48377 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Rfx1P48377 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Rfx1P48377 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Rfx1P48377 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Rfx1P48377 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC6.82□□□□□ -1.32
Rfx1P48377 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Rfx1P48377 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
Rfx1P48377 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Rfx1P48377 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Rfx1P48377 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Rfx1P48377 Gm15766-201ENSMUST00000118025 813 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 Gm12850-201ENSMUST00000119210 436 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 Gm11472-201ENSMUST00000121305 556 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 Gm12340-201ENSMUST00000121617 462 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 Gm12819-201ENSMUST00000122223 629 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC6.82□□□□□ -1.32
Rfx1P48377 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Rfx1P48377 Gm22160-201ENSMUST00000158405 328 ntBASIC6.82□□□□□ -1.32
Rfx1P48377 Gm25904-201ENSMUST00000158491 143 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms