Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.36□□□□□ -1.55
LdlrP35951 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
LdlrP35951 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.36□□□□□ -1.55
LdlrP35951 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
LdlrP35951 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.36□□□□□ -1.55
LdlrP35951 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.35□□□□□ -1.55
LdlrP35951 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LdlrP35951 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
LdlrP35951 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
LdlrP35951 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
LdlrP35951 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LdlrP35951 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.35□□□□□ -1.55
LdlrP35951 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LdlrP35951 Gm37703-201ENSMUST00000192292 1784 ntBASIC5.35□□□□□ -1.55
LdlrP35951 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LdlrP35951 Gm14988-201ENSMUST00000117224 1548 ntBASIC5.35□□□□□ -1.55
LdlrP35951 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LdlrP35951 Gm45322-201ENSMUST00000211642 1361 ntBASIC5.35□□□□□ -1.55
LdlrP35951 Gm23942-201ENSMUST00000101956 107 ntBASIC5.35□□□□□ -1.55
LdlrP35951 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
LdlrP35951 Mir193b-201ENSMUST00000103784 79 ntBASIC5.35□□□□□ -1.55
LdlrP35951 Mir190b-201ENSMUST00000104803 80 ntBASIC5.35□□□□□ -1.55
LdlrP35951 Mir292-201ENSMUST00000104847 82 ntBASIC5.35□□□□□ -1.55
LdlrP35951 Gm42606-201ENSMUST00000114209 239 ntBASIC5.35□□□□□ -1.55
LdlrP35951 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.35□□□□□ -1.55
LdlrP35951 Gm12006-201ENSMUST00000120786 403 ntBASIC5.35□□□□□ -1.55
LdlrP35951 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC5.35□□□□□ -1.55
LdlrP35951 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.35□□□□□ -1.55
LdlrP35951 Gm13471-201ENSMUST00000122057 433 ntBASIC5.35□□□□□ -1.55
LdlrP35951 Gm15367-201ENSMUST00000122398 1016 ntBASIC5.35□□□□□ -1.55
LdlrP35951 Mir1898-201ENSMUST00000122643 83 ntBASIC5.35□□□□□ -1.55
LdlrP35951 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.35□□□□□ -1.55
LdlrP35951 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LdlrP35951 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LdlrP35951 Gm17142-201ENSMUST00000164933 645 ntBASIC5.35□□□□□ -1.55
LdlrP35951 Gm9294-201ENSMUST00000165198 789 ntBASIC5.35□□□□□ -1.55
LdlrP35951 Gm18343-201ENSMUST00000172802 604 ntBASIC5.35□□□□□ -1.55
LdlrP35951 Gm11392-201ENSMUST00000181419 710 ntBASIC5.35□□□□□ -1.55
LdlrP35951 Gm7654-201ENSMUST00000186738 683 ntBASIC5.35□□□□□ -1.55
LdlrP35951 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.35□□□□□ -1.55
LdlrP35951 Igkv12-47-201ENSMUST00000196961 356 ntBASIC5.35□□□□□ -1.55
LdlrP35951 Gm44330-201ENSMUST00000200106 143 ntBASIC5.35□□□□□ -1.55
LdlrP35951 Gm43973-201ENSMUST00000203562 210 ntBASIC5.35□□□□□ -1.55
LdlrP35951 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC5.35□□□□□ -1.55
LdlrP35951 AC152979.4-201ENSMUST00000219893 379 ntBASIC5.35□□□□□ -1.55
LdlrP35951 Gm35558-202ENSMUST00000221819 499 ntBASIC5.35□□□□□ -1.55
LdlrP35951 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LdlrP35951 AC165146.1-201ENSMUST00000223777 900 ntBASIC5.35□□□□□ -1.55
LdlrP35951 CT025579.3-201ENSMUST00000224543 451 ntBASIC5.35□□□□□ -1.55
LdlrP35951 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC5.35□□□□□ -1.55
LdlrP35951 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LdlrP35951 Gm25004-201ENSMUST00000083811 161 ntBASIC5.35□□□□□ -1.55
LdlrP35951 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
LdlrP35951 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LdlrP35951 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
LdlrP35951 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LdlrP35951 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
LdlrP35951 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
LdlrP35951 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
LdlrP35951 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LdlrP35951 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.35□□□□□ -1.55
LdlrP35951 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
LdlrP35951 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
LdlrP35951 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
LdlrP35951 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
LdlrP35951 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LdlrP35951 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LdlrP35951 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
LdlrP35951 Gm37959-201ENSMUST00000191700 2897 ntBASIC5.34□□□□□ -1.55
LdlrP35951 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
LdlrP35951 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LdlrP35951 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
LdlrP35951 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LdlrP35951 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.34□□□□□ -1.55
LdlrP35951 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.34□□□□□ -1.55
LdlrP35951 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
LdlrP35951 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
LdlrP35951 Gm14981-201ENSMUST00000117325 943 ntBASIC5.34□□□□□ -1.55
LdlrP35951 Gm14885-201ENSMUST00000117969 496 ntBASIC5.34□□□□□ -1.55
LdlrP35951 Gm15766-201ENSMUST00000118025 813 ntBASIC5.34□□□□□ -1.55
LdlrP35951 Gm2318-201ENSMUST00000119623 639 ntBASIC5.34□□□□□ -1.55
LdlrP35951 Gm12685-201ENSMUST00000121702 214 ntBASIC5.34□□□□□ -1.55
LdlrP35951 Gm22312-201ENSMUST00000158005 130 ntBASIC5.34□□□□□ -1.55
LdlrP35951 Gm7438-201ENSMUST00000177664 639 ntBASIC5.34□□□□□ -1.55
LdlrP35951 Gm7408-201ENSMUST00000178014 639 ntBASIC5.34□□□□□ -1.55
LdlrP35951 Gm7386-201ENSMUST00000178020 639 ntBASIC5.34□□□□□ -1.55
LdlrP35951 Gm3657-201ENSMUST00000178170 639 ntBASIC5.34□□□□□ -1.55
LdlrP35951 Gm7415-201ENSMUST00000178205 639 ntBASIC5.34□□□□□ -1.55
LdlrP35951 Gm7398-201ENSMUST00000178589 639 ntBASIC5.34□□□□□ -1.55
LdlrP35951 Gm7391-201ENSMUST00000178680 639 ntBASIC5.34□□□□□ -1.55
LdlrP35951 Gm7375-201ENSMUST00000179232 639 ntBASIC5.34□□□□□ -1.55
LdlrP35951 Gm3681-201ENSMUST00000179940 639 ntBASIC5.34□□□□□ -1.55
LdlrP35951 Gm23379-201ENSMUST00000180026 107 ntBASIC5.34□□□□□ -1.55
LdlrP35951 Gm27538-201ENSMUST00000185065 294 ntBASIC5.34□□□□□ -1.55
LdlrP35951 Gm18117-201ENSMUST00000187720 742 ntBASIC5.34□□□□□ -1.55
LdlrP35951 Gm43015-201ENSMUST00000199087 565 ntBASIC5.34□□□□□ -1.55
LdlrP35951 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC5.34□□□□□ -1.55
LdlrP35951 Gm8719-201ENSMUST00000203602 534 ntBASIC5.34□□□□□ -1.55
LdlrP35951 Gm45249-201ENSMUST00000211021 348 ntBASIC5.34□□□□□ -1.55
LdlrP35951 Gm45789-201ENSMUST00000213038 364 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms