Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Sdc1P18828 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Sdc1P18828 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Sdc1P18828 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Sdc1P18828 Gm38069-201ENSMUST00000195360 2144 ntBASIC3.73□□□□□ -1.81
Sdc1P18828 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Sdc1P18828 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC3.73□□□□□ -1.81
Sdc1P18828 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Sdc1P18828 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Sdc1P18828 Gm7658-201ENSMUST00000119064 1124 ntBASIC3.73□□□□□ -1.81
Sdc1P18828 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC3.73□□□□□ -1.81
Sdc1P18828 Gm15428-201ENSMUST00000121352 333 ntBASIC3.73□□□□□ -1.81
Sdc1P18828 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC3.73□□□□□ -1.81
Sdc1P18828 Gm7846-201ENSMUST00000145844 274 ntBASIC3.73□□□□□ -1.81
Sdc1P18828 Gm7316-201ENSMUST00000165395 445 ntBASIC3.73□□□□□ -1.81
Sdc1P18828 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC3.73□□□□□ -1.81
Sdc1P18828 Gm2959-201ENSMUST00000169844 621 ntBASIC3.73□□□□□ -1.81
Sdc1P18828 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Sdc1P18828 Mir3473g-201ENSMUST00000183494 136 ntBASIC3.73□□□□□ -1.81
Sdc1P18828 Gm29086-201ENSMUST00000186774 222 ntBASIC3.73□□□□□ -1.81
Sdc1P18828 Gm29085-201ENSMUST00000187108 225 ntBASIC3.73□□□□□ -1.81
Sdc1P18828 Gm9775-201ENSMUST00000189402 331 ntBASIC3.73□□□□□ -1.81
Sdc1P18828 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC3.73□□□□□ -1.81
Sdc1P18828 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC3.73□□□□□ -1.81
Sdc1P18828 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC3.73□□□□□ -1.81
Sdc1P18828 Gm44239-201ENSMUST00000204228 271 ntBASIC3.73□□□□□ -1.81
Sdc1P18828 Gm19237-201ENSMUST00000205036 1132 ntBASIC3.73□□□□□ -1.81
Sdc1P18828 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC3.73□□□□□ -1.81
Sdc1P18828 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC3.73□□□□□ -1.81
Sdc1P18828 Gm7333-201ENSMUST00000213449 1060 ntBASIC3.73□□□□□ -1.81
Sdc1P18828 CT025616.1-201ENSMUST00000221158 412 ntBASIC3.73□□□□□ -1.81
Sdc1P18828 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC3.73□□□□□ -1.81
Sdc1P18828 AC122465.3-201ENSMUST00000221644 355 ntBASIC3.73□□□□□ -1.81
Sdc1P18828 CT030166.1-201ENSMUST00000222654 357 ntBASIC3.73□□□□□ -1.81
Sdc1P18828 AC102542.1-201ENSMUST00000225204 1138 ntBASIC3.73□□□□□ -1.81
Sdc1P18828 Vmn1r41-205ENSMUST00000227630 827 ntBASIC3.73□□□□□ -1.81
Sdc1P18828 Olfr467-201ENSMUST00000084756 927 ntBASIC3.73□□□□□ -1.81
Sdc1P18828 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Sdc1P18828 n-R5s152-201ENSMUST00000093641 119 ntBASIC3.73□□□□□ -1.81
Sdc1P18828 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Sdc1P18828 Gm37652-201ENSMUST00000195290 2095 ntBASIC3.73□□□□□ -1.81
Sdc1P18828 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC3.73□□□□□ -1.81
Sdc1P18828 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Sdc1P18828 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Sdc1P18828 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Sdc1P18828 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Sdc1P18828 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC3.73□□□□□ -1.81
Sdc1P18828 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Sdc1P18828 AC113059.3-201ENSMUST00000217423 2777 ntBASIC3.73□□□□□ -1.81
Sdc1P18828 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC3.73□□□□□ -1.81
Sdc1P18828 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Sdc1P18828 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Sdc1P18828 Gm38057-201ENSMUST00000195551 3203 ntBASIC3.72□□□□□ -1.81
Sdc1P18828 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC3.72□□□□□ -1.81
Sdc1P18828 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Sdc1P18828 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
Sdc1P18828 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Sdc1P18828 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Sdc1P18828 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Sdc1P18828 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
Sdc1P18828 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Sdc1P18828 Gm11882-201ENSMUST00000121463 506 ntBASIC3.72□□□□□ -1.81
Sdc1P18828 Klra11-ps-201ENSMUST00000122033 810 ntBASIC3.72□□□□□ -1.81
Sdc1P18828 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC3.72□□□□□ -1.81
Sdc1P18828 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Sdc1P18828 Gm25839-201ENSMUST00000158921 103 ntBASIC3.72□□□□□ -1.81
Sdc1P18828 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Sdc1P18828 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC3.72□□□□□ -1.81
Sdc1P18828 Mir6238-201ENSMUST00000184140 129 ntBASIC3.72□□□□□ -1.81
Sdc1P18828 Gm5368-201ENSMUST00000189012 589 ntBASIC3.72□□□□□ -1.81
Sdc1P18828 Gm28190-201ENSMUST00000189766 722 ntBASIC3.72□□□□□ -1.81
Sdc1P18828 Gm28500-201ENSMUST00000190286 151 ntBASIC3.72□□□□□ -1.81
Sdc1P18828 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC3.72□□□□□ -1.81
Sdc1P18828 Gm29793-201ENSMUST00000202874 460 ntBASIC3.72□□□□□ -1.81
Sdc1P18828 Gm45032-201ENSMUST00000205375 520 ntBASIC3.72□□□□□ -1.81
Sdc1P18828 Gm44521-201ENSMUST00000206469 217 ntBASIC3.72□□□□□ -1.81
Sdc1P18828 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC3.72□□□□□ -1.81
Sdc1P18828 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC3.72□□□□□ -1.81
Sdc1P18828 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC3.72□□□□□ -1.81
Sdc1P18828 Gm17779-201ENSMUST00000213395 394 ntBASIC3.72□□□□□ -1.81
Sdc1P18828 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC3.72□□□□□ -1.81
Sdc1P18828 Gm7822-201ENSMUST00000222433 581 ntBASIC3.72□□□□□ -1.81
Sdc1P18828 Gm7768-201ENSMUST00000222988 597 ntBASIC3.72□□□□□ -1.81
Sdc1P18828 AC174797.2-203ENSMUST00000224017 716 ntBASIC3.72□□□□□ -1.81
Sdc1P18828 AC164116.1-201ENSMUST00000225810 622 ntBASIC3.72□□□□□ -1.81
Sdc1P18828 AC123665.4-201ENSMUST00000228790 249 ntBASIC3.72□□□□□ -1.81
Sdc1P18828 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Sdc1P18828 Gm10064-201ENSMUST00000071235 399 ntBASIC3.72□□□□□ -1.81
Sdc1P18828 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Sdc1P18828 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Sdc1P18828 Gm26449-201ENSMUST00000082452 104 ntBASIC3.72□□□□□ -1.81
Sdc1P18828 Gm23300-201ENSMUST00000082712 125 ntBASIC3.72□□□□□ -1.81
Sdc1P18828 Snord14e-201ENSMUST00000082857 90 ntBASIC3.72□□□□□ -1.81
Sdc1P18828 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Sdc1P18828 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Sdc1P18828 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
Sdc1P18828 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Sdc1P18828 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Sdc1P18828 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
Sdc1P18828 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms