Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Cdx1P18111 Gm4859-201ENSMUST00000199625 787 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 Gm44673-201ENSMUST00000205692 996 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Cdx1P18111 Gm18541-201ENSMUST00000215935 538 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 AC121804.1-201ENSMUST00000221016 394 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 AC132433.1-201ENSMUST00000221553 1101 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 CT010486.1-201ENSMUST00000224609 422 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Cdx1P18111 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC3.95□□□□□ -1.78
Cdx1P18111 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Cdx1P18111 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Cdx1P18111 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Cdx1P18111 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 Gm23875-201ENSMUST00000083711 318 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 Gm25005-201ENSMUST00000083812 156 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Cdx1P18111 Gm44567-201ENSMUST00000205645 2631 ntBASIC3.95□□□□□ -1.78
Cdx1P18111 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Cdx1P18111 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Cdx1P18111 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
Cdx1P18111 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Cdx1P18111 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Cdx1P18111 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Cdx1P18111 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Cdx1P18111 Gm38375-201ENSMUST00000194610 2227 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Cdx1P18111 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Cdx1P18111 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Cdx1P18111 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Cdx1P18111 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
Cdx1P18111 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Cdx1P18111 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Cdx1P18111 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Cdx1P18111 Gm14878-201ENSMUST00000118167 293 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 Gm12041-201ENSMUST00000121606 602 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Cdx1P18111 Gm23883-201ENSMUST00000122686 290 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Cdx1P18111 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Cdx1P18111 Gm26187-201ENSMUST00000157693 101 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 Gm26312-201ENSMUST00000157769 165 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 Gm25383-201ENSMUST00000157810 144 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 Gm25456-201ENSMUST00000157952 109 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 Gm23385-201ENSMUST00000158592 295 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 Gm23702-201ENSMUST00000158840 130 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 Gm4222-201ENSMUST00000165784 470 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 Gm6650-201ENSMUST00000166710 614 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 Gm17086-201ENSMUST00000171346 484 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Cdx1P18111 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Cdx1P18111 Gm25019-201ENSMUST00000179732 110 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 Gm37882-201ENSMUST00000195254 196 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Cdx1P18111 Gm43444-201ENSMUST00000198123 291 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 Gm18611-201ENSMUST00000200334 1118 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 Gm43418-201ENSMUST00000201334 428 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC3.94□□□□□ -1.78
Cdx1P18111 Glud-ps-201ENSMUST00000206310 657 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 Gm18850-201ENSMUST00000211578 388 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 AC183268.2-201ENSMUST00000214513 446 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 AC164567.4-201ENSMUST00000219708 483 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Cdx1P18111 Gm20368-201ENSMUST00000220716 301 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Cdx1P18111 AC154738.5-201ENSMUST00000227397 310 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC3.94□□□□□ -1.78
Cdx1P18111 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Cdx1P18111 Mir27a-201ENSMUST00000083510 87 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Cdx1P18111 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Cdx1P18111 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Cdx1P18111 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Cdx1P18111 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Cdx1P18111 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Cdx1P18111 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Cdx1P18111 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Cdx1P18111 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Cdx1P18111 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
Cdx1P18111 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Cdx1P18111 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
Cdx1P18111 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.94□□□□□ -1.78
Cdx1P18111 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Cdx1P18111 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Cdx1P18111 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Cdx1P18111 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Cdx1P18111 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
Cdx1P18111 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.93□□□□□ -1.78
Cdx1P18111 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.93□□□□□ -1.78
Cdx1P18111 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Cdx1P18111 Gm37964-201ENSMUST00000192459 4905 ntBASIC3.93□□□□□ -1.78
Cdx1P18111 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Cdx1P18111 Gm2123-201ENSMUST00000221476 2836 ntBASIC3.93□□□□□ -1.78
Cdx1P18111 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC3.93□□□□□ -1.78
Cdx1P18111 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms