Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Col6a3E9PWQ3 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Col6a3E9PWQ3 Gm8473-201ENSMUST00000176697 1885 ntBASIC4.28□□□□□ -1.72
Col6a3E9PWQ3 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.28□□□□□ -1.72
Col6a3E9PWQ3 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a3E9PWQ3 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a3E9PWQ3 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a3E9PWQ3 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a3E9PWQ3 Lrat-201ENSMUST00000029632 5351 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a3E9PWQ3 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a3E9PWQ3 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
Col6a3E9PWQ3 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Gm15981-201ENSMUST00000119196 457 ntBASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Trbv7-201ENSMUST00000193339 402 ntBASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Gm18228-201ENSMUST00000217297 1091 ntBASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Gm9370-201ENSMUST00000222787 609 ntBASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Sptbn1-203ENSMUST00000102838 9107 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Gm23084-201ENSMUST00000157850 114 ntBASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Gm19039-201ENSMUST00000204363 575 ntBASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Gm44847-201ENSMUST00000207104 1991 ntBASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Gm43317-201ENSMUST00000197924 2544 ntBASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Gm37846-201ENSMUST00000191840 3774 ntBASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Gm25765-201ENSMUST00000104100 132 ntBASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Gm28282-201ENSMUST00000186072 186 ntBASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 AC107864.1-201ENSMUST00000217937 496 ntBASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 AC121966.1-201ENSMUST00000221458 282 ntBASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 AC121947.1-201ENSMUST00000221755 1145 ntBASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 AC154727.1-201ENSMUST00000226537 499 ntBASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a3E9PWQ3 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 AC129085.3-201ENSMUST00000225686 1705 ntBASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Gm16216-201ENSMUST00000118970 1111 ntBASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Gm24780-201ENSMUST00000157635 143 ntBASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Gm26490-201ENSMUST00000157879 140 ntBASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 AC155839.1-201ENSMUST00000200105 147 ntBASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Gm43930-201ENSMUST00000203868 845 ntBASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 AC174797.3-203ENSMUST00000225749 2078 ntBASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Dcdc5-202ENSMUST00000122388 4957 ntBASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Ep400-204ENSMUST00000112436 10685 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Gm10067-201ENSMUST00000179462 348 ntBASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Gm42832-201ENSMUST00000196361 745 ntBASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 CT485612.3-201ENSMUST00000222179 408 ntBASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Helz2-202ENSMUST00000108831 10109 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Malat1-201ENSMUST00000172812 6983 ntBASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Gm43428-201ENSMUST00000200108 3845 ntBASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col6a3E9PWQ3 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms