Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 AC166902.1-201ENSMUST00000216653 517 ntBASIC4.42□□□□□ -1.7
Lsm1Q8VC85 Gm40692-201ENSMUST00000220411 491 ntBASIC4.42□□□□□ -1.7
Lsm1Q8VC85 AC107369.1-201ENSMUST00000227373 860 ntBASIC4.42□□□□□ -1.7
Lsm1Q8VC85 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Lsm1Q8VC85 Gm22423-201ENSMUST00000082861 184 ntBASIC4.42□□□□□ -1.7
Lsm1Q8VC85 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Lsm1Q8VC85 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
Lsm1Q8VC85 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
Lsm1Q8VC85 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Lsm1Q8VC85 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
Lsm1Q8VC85 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Lsm1Q8VC85 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Lsm1Q8VC85 Gm17791-201ENSMUST00000185660 1501 ntBASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Lsm1Q8VC85 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Gm13000-201ENSMUST00000120937 496 ntBASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Gm5401-201ENSMUST00000122444 365 ntBASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Gm25906-201ENSMUST00000158489 126 ntBASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Gm5558-201ENSMUST00000178933 495 ntBASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC4.41□□□□□ -1.7
Lsm1Q8VC85 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Gm43304-201ENSMUST00000196803 326 ntBASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Gm44237-201ENSMUST00000205183 936 ntBASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.41□□□□□ -1.7
Lsm1Q8VC85 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.41□□□□□ -1.7
Lsm1Q8VC85 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.41□□□□□ -1.7
Lsm1Q8VC85 AC116724.1-201ENSMUST00000227900 972 ntBASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Gm23875-201ENSMUST00000083711 318 ntBASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Gm6043-201ENSMUST00000099961 492 ntBASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Gm36927-201ENSMUST00000192504 1841 ntBASIC4.41□□□□□ -1.7
Lsm1Q8VC85 AC153959.1-201ENSMUST00000213617 1694 ntBASIC4.41□□□□□ -1.7
Lsm1Q8VC85 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Lsm1Q8VC85 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Lsm1Q8VC85 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.4□□□□□ -1.7
Lsm1Q8VC85 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.4□□□□□ -1.7
Lsm1Q8VC85 Gm42704-201ENSMUST00000196875 1778 ntBASIC4.4□□□□□ -1.7
Lsm1Q8VC85 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.4□□□□□ -1.7
Lsm1Q8VC85 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Gm12978-201ENSMUST00000121250 522 ntBASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Gm25447-201ENSMUST00000158997 128 ntBASIC4.4□□□□□ -1.71
Lsm1Q8VC85 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Gm16545-201ENSMUST00000161968 463 ntBASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Mir5110-201ENSMUST00000175537 87 ntBASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC4.4□□□□□ -1.71
Lsm1Q8VC85 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Gm37996-201ENSMUST00000191859 367 ntBASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Gm37631-201ENSMUST00000192275 364 ntBASIC4.4□□□□□ -1.71
Lsm1Q8VC85 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Trav3-2-201ENSMUST00000198999 305 ntBASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Gm19065-202ENSMUST00000203910 1165 ntBASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Lsm1Q8VC85 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Prl7a1-203ENSMUST00000224852 1283 ntBASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Mir31-201ENSMUST00000083474 106 ntBASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Mir337-201ENSMUST00000083592 97 ntBASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Gm24031-201ENSMUST00000083930 131 ntBASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Lsm1Q8VC85 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
Lsm1Q8VC85 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Lsm1Q8VC85 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Lsm1Q8VC85 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Lsm1Q8VC85 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Lsm1Q8VC85 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.39□□□□□ -1.71
Lsm1Q8VC85 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.39□□□□□ -1.71
Lsm1Q8VC85 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms