Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Gm12482-201ENSMUST00000120435 630 ntBASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Gm15044-201ENSMUST00000120703 598 ntBASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Gm6175-201ENSMUST00000121351 400 ntBASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Gm26169-201ENSMUST00000158420 135 ntBASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Gm2389-201ENSMUST00000160487 189 ntBASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Gm18199-201ENSMUST00000173820 835 ntBASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Gm2877-201ENSMUST00000178248 1204 ntBASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Gm8324-201ENSMUST00000178911 1204 ntBASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Gm27960-201ENSMUST00000183445 184 ntBASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Mir7653-201ENSMUST00000184358 61 ntBASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Gm28625-201ENSMUST00000188309 205 ntBASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Gm38008-201ENSMUST00000195333 518 ntBASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Gm17937-201ENSMUST00000197908 742 ntBASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Gm43456-201ENSMUST00000202519 457 ntBASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Gm17988-201ENSMUST00000208796 535 ntBASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Gm22456-201ENSMUST00000082578 125 ntBASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Gm18422-202ENSMUST00000203798 2214 ntBASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Gm36927-201ENSMUST00000192504 1841 ntBASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Gm43329-201ENSMUST00000200120 3232 ntBASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Gm26078-201ENSMUST00000104067 128 ntBASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Gm12584-201ENSMUST00000117109 1105 ntBASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Gm15180-201ENSMUST00000117745 492 ntBASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Gm3267-201ENSMUST00000118671 473 ntBASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Gm25102-201ENSMUST00000122479 112 ntBASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Gm24065-201ENSMUST00000157487 264 ntBASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Gm24719-201ENSMUST00000157520 110 ntBASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Gm16557-201ENSMUST00000159182 191 ntBASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Gm27861-201ENSMUST00000183920 214 ntBASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Mir7211-201ENSMUST00000184071 63 ntBASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Mir7037-201ENSMUST00000184414 65 ntBASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Gm5368-201ENSMUST00000189012 589 ntBASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Gm37934-201ENSMUST00000192902 402 ntBASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Gm4742-201ENSMUST00000200261 771 ntBASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Gm19060-201ENSMUST00000201959 421 ntBASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Gm5885-202ENSMUST00000203357 528 ntBASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Gm8039-201ENSMUST00000204758 712 ntBASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Gm44128-201ENSMUST00000204909 219 ntBASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Gm19201-201ENSMUST00000210127 778 ntBASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Gm3333-202ENSMUST00000221763 1044 ntBASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 AC154636.1-201ENSMUST00000223226 126 ntBASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 AC154592.1-201ENSMUST00000225784 574 ntBASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 CT010505.1-201ENSMUST00000227026 396 ntBASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Gm38240-201ENSMUST00000195110 2487 ntBASIC5.81□□□□□ -1.48
Ccdc9Q8VC31 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms