Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 Gm11742-201ENSMUST00000119903 233 ntBASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 Gm11965-201ENSMUST00000122017 277 ntBASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 Gm29086-201ENSMUST00000186774 222 ntBASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 Gm29085-201ENSMUST00000187108 225 ntBASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 Gm28389-201ENSMUST00000190090 697 ntBASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 Rnu3a-202ENSMUST00000196710 213 ntBASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 Gm43144-201ENSMUST00000198256 485 ntBASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 Gm5288-201ENSMUST00000198323 1119 ntBASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 Gm44665-201ENSMUST00000205381 251 ntBASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 Gm45236-201ENSMUST00000208632 229 ntBASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 Ap3m1-208ENSMUST00000224016 764 ntBASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 Ear-ps9-202ENSMUST00000226796 245 ntBASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 AC140209.1-201ENSMUST00000227875 284 ntBASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 Gm26203-201ENSMUST00000082911 114 ntBASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 Rnu3a-201ENSMUST00000083936 214 ntBASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Rpp40Q8R1F9 Gm42841-201ENSMUST00000199806 1932 ntBASIC5.09□□□□□ -1.6
Rpp40Q8R1F9 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Rpp40Q8R1F9 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Mir92b-201ENSMUST00000102300 83 ntBASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Gm23594-201ENSMUST00000104307 134 ntBASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Gm14599-201ENSMUST00000120469 474 ntBASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Gm12893-201ENSMUST00000121732 275 ntBASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Gm22326-201ENSMUST00000158897 351 ntBASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Gm28503-201ENSMUST00000185966 147 ntBASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Gm44332-201ENSMUST00000203712 433 ntBASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Gm18791-201ENSMUST00000204611 726 ntBASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Olfr881-201ENSMUST00000074611 948 ntBASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Gm3675-201ENSMUST00000175904 1653 ntBASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 AC159476.1-201ENSMUST00000215914 1668 ntBASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Gm37764-201ENSMUST00000194664 2150 ntBASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rpp40Q8R1F9 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Gm12186-201ENSMUST00000119050 945 ntBASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Gm12988-201ENSMUST00000119054 478 ntBASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 Gm16589-201ENSMUST00000159522 918 ntBASIC5.07□□□□□ -1.6
Rpp40Q8R1F9 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 129.1 ms