Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC5.52□□□□□ -1.53
Trim9Q8C7M3 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC5.52□□□□□ -1.53
Trim9Q8C7M3 Gm25389-201ENSMUST00000157340 286 ntBASIC5.52□□□□□ -1.53
Trim9Q8C7M3 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC5.52□□□□□ -1.53
Trim9Q8C7M3 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC5.52□□□□□ -1.53
Trim9Q8C7M3 Gm5777-201ENSMUST00000177265 448 ntBASIC5.52□□□□□ -1.53
Trim9Q8C7M3 Gm2497-201ENSMUST00000189539 601 ntBASIC5.52□□□□□ -1.53
Trim9Q8C7M3 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim9Q8C7M3 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC5.52□□□□□ -1.53
Trim9Q8C7M3 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trim9Q8C7M3 Gm43655-201ENSMUST00000197367 222 ntBASIC5.52□□□□□ -1.53
Trim9Q8C7M3 Gm43408-201ENSMUST00000198263 440 ntBASIC5.52□□□□□ -1.53
Trim9Q8C7M3 Gm43708-201ENSMUST00000198857 961 ntBASIC5.52□□□□□ -1.53
Trim9Q8C7M3 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.52□□□□□ -1.53
Trim9Q8C7M3 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC5.52□□□□□ -1.53
Trim9Q8C7M3 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim9Q8C7M3 AC069561.2-201ENSMUST00000217596 420 ntBASIC5.52□□□□□ -1.53
Trim9Q8C7M3 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim9Q8C7M3 Gm9512-201ENSMUST00000223112 497 ntBASIC5.52□□□□□ -1.53
Trim9Q8C7M3 Vmn1r89-206ENSMUST00000227319 985 ntBASIC5.52□□□□□ -1.53
Trim9Q8C7M3 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Trim9Q8C7M3 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Trim9Q8C7M3 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Trim9Q8C7M3 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Trim9Q8C7M3 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Trim9Q8C7M3 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Trim9Q8C7M3 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Gm6913-201ENSMUST00000100019 348 ntBASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Gm12393-201ENSMUST00000117084 848 ntBASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Gm2199-201ENSMUST00000119065 874 ntBASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Gm13902-201ENSMUST00000120168 605 ntBASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Gm13808-201ENSMUST00000121353 184 ntBASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Gm15116-201ENSMUST00000122248 663 ntBASIC5.51□□□□□ -1.53
Trim9Q8C7M3 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Ear-ps10-201ENSMUST00000161871 460 ntBASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Gm21894-201ENSMUST00000179631 546 ntBASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Gm18828-202ENSMUST00000181035 310 ntBASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Mir6343-201ENSMUST00000183584 84 ntBASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Gm20561-201ENSMUST00000188131 292 ntBASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Gm6261-201ENSMUST00000204707 760 ntBASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Gm4574-201ENSMUST00000207804 542 ntBASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Gm45660-201ENSMUST00000210267 151 ntBASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Gm19170-201ENSMUST00000212440 1084 ntBASIC5.51□□□□□ -1.53
Trim9Q8C7M3 AC138284.2-201ENSMUST00000213982 567 ntBASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.51□□□□□ -1.53
Trim9Q8C7M3 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.51□□□□□ -1.53
Trim9Q8C7M3 AC156952.1-201ENSMUST00000220361 793 ntBASIC5.51□□□□□ -1.53
Trim9Q8C7M3 AC166358.6-201ENSMUST00000221834 1206 ntBASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Gm6474-201ENSMUST00000223250 699 ntBASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Gm7040-201ENSMUST00000223271 443 ntBASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Zfp429-203ENSMUST00000224684 524 ntBASIC5.51□□□□□ -1.53
Trim9Q8C7M3 AC125523.1-201ENSMUST00000228018 934 ntBASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim9Q8C7M3 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim9Q8C7M3 Gm37407-201ENSMUST00000194793 1316 ntBASIC5.5□□□□□ -1.53
Trim9Q8C7M3 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trim9Q8C7M3 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Trim9Q8C7M3 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
Trim9Q8C7M3 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trim9Q8C7M3 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.5□□□□□ -1.53
Trim9Q8C7M3 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Trim9Q8C7M3 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trim9Q8C7M3 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trim9Q8C7M3 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trim9Q8C7M3 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Trim9Q8C7M3 Gm11406-201ENSMUST00000117418 484 ntBASIC5.5□□□□□ -1.53
Trim9Q8C7M3 Gm11550-201ENSMUST00000118210 699 ntBASIC5.5□□□□□ -1.53
Trim9Q8C7M3 Gm11631-201ENSMUST00000119220 156 ntBASIC5.5□□□□□ -1.53
Trim9Q8C7M3 Gm11790-201ENSMUST00000119569 455 ntBASIC5.5□□□□□ -1.53
Trim9Q8C7M3 Gm11404-201ENSMUST00000120872 494 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms