Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC7.01□□□□□ -1.29
Usp40Q8BWR4 Gm42983-201ENSMUST00000199879 815 ntBASIC7.01□□□□□ -1.29
Usp40Q8BWR4 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC7.01□□□□□ -1.29
Usp40Q8BWR4 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Usp40Q8BWR4 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Usp40Q8BWR4 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Usp40Q8BWR4 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Usp40Q8BWR4 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Usp40Q8BWR4 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Usp40Q8BWR4 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Usp40Q8BWR4 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Usp40Q8BWR4 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Usp40Q8BWR4 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Usp40Q8BWR4 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Usp40Q8BWR4 Gm14849-201ENSMUST00000122293 2846 ntBASIC7□□□□□ -1.29
Usp40Q8BWR4 Gm45222-201ENSMUST00000207029 4307 ntBASIC7□□□□□ -1.29
Usp40Q8BWR4 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Usp40Q8BWR4 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC7□□□□□ -1.29
Usp40Q8BWR4 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC7□□□□□ -1.29
Usp40Q8BWR4 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC7□□□□□ -1.29
Usp40Q8BWR4 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Usp40Q8BWR4 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC7□□□□□ -1.29
Usp40Q8BWR4 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Usp40Q8BWR4 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC7□□□□□ -1.29
Usp40Q8BWR4 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC7□□□□□ -1.29
Usp40Q8BWR4 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
Usp40Q8BWR4 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Usp40Q8BWR4 Gm15390-201ENSMUST00000120323 738 ntBASIC7□□□□□ -1.29
Usp40Q8BWR4 Gm8080-201ENSMUST00000122046 1155 ntBASIC7□□□□□ -1.29
Usp40Q8BWR4 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC7□□□□□ -1.29
Usp40Q8BWR4 Gm5353-201ENSMUST00000139800 793 ntBASIC7□□□□□ -1.29
Usp40Q8BWR4 Gm24854-201ENSMUST00000158025 98 ntBASIC7□□□□□ -1.29
Usp40Q8BWR4 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Usp40Q8BWR4 Gm17081-201ENSMUST00000167363 478 ntBASIC7□□□□□ -1.29
Usp40Q8BWR4 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC7□□□□□ -1.29
Usp40Q8BWR4 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC7□□□□□ -1.29
Usp40Q8BWR4 Gm20811-201ENSMUST00000190500 553 ntBASIC7□□□□□ -1.29
Usp40Q8BWR4 Rnu3a-202ENSMUST00000196710 213 ntBASIC7□□□□□ -1.29
Usp40Q8BWR4 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC7□□□□□ -1.29
Usp40Q8BWR4 Gm19617-201ENSMUST00000202977 308 ntBASIC7□□□□□ -1.29
Usp40Q8BWR4 Gm44952-201ENSMUST00000204443 433 ntBASIC7□□□□□ -1.29
Usp40Q8BWR4 Gm44307-201ENSMUST00000204466 764 ntBASIC7□□□□□ -1.29
Usp40Q8BWR4 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC7□□□□□ -1.29
Usp40Q8BWR4 CT954323.2-201ENSMUST00000222056 213 ntBASIC7□□□□□ -1.29
Usp40Q8BWR4 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC7□□□□□ -1.29
Usp40Q8BWR4 Olfr192-201ENSMUST00000080251 925 ntBASIC7□□□□□ -1.29
Usp40Q8BWR4 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC7□□□□□ -1.29
Usp40Q8BWR4 Gm26330-201ENSMUST00000082817 104 ntBASIC7□□□□□ -1.29
Usp40Q8BWR4 Rnu3a-201ENSMUST00000083936 214 ntBASIC7□□□□□ -1.29
Usp40Q8BWR4 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC7□□□□□ -1.29
Usp40Q8BWR4 Gm42503-201ENSMUST00000199080 3706 ntBASIC7□□□□□ -1.29
Usp40Q8BWR4 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Usp40Q8BWR4 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC7□□□□□ -1.29
Usp40Q8BWR4 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
Usp40Q8BWR4 AC121997.2-201ENSMUST00000228095 2294 ntBASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Gm4759-201ENSMUST00000183414 6622 ntBASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Gm14677-201ENSMUST00000117866 486 ntBASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Gm12294-201ENSMUST00000119723 490 ntBASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Gm14369-201ENSMUST00000121355 285 ntBASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Gm12770-201ENSMUST00000121734 462 ntBASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Usp40Q8BWR4 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Gm20543-201ENSMUST00000174200 726 ntBASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC6.99□□□□□ -1.29
Usp40Q8BWR4 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Vmn1r82-202ENSMUST00000191002 918 ntBASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Gm43350-201ENSMUST00000196382 711 ntBASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Gm20074-201ENSMUST00000208144 484 ntBASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Gm11360-201ENSMUST00000221898 262 ntBASIC6.99□□□□□ -1.29
Usp40Q8BWR4 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC6.99□□□□□ -1.29
Usp40Q8BWR4 AC131085.1-201ENSMUST00000224746 656 ntBASIC6.99□□□□□ -1.29
Usp40Q8BWR4 AC130823.2-201ENSMUST00000226169 290 ntBASIC6.99□□□□□ -1.29
Usp40Q8BWR4 AC139294.1-201ENSMUST00000226708 571 ntBASIC6.99□□□□□ -1.29
Usp40Q8BWR4 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
Usp40Q8BWR4 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Usp40Q8BWR4 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Gm43784-201ENSMUST00000202922 2436 ntBASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC6.99□□□□□ -1.29
Usp40Q8BWR4 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.99□□□□□ -1.29
Usp40Q8BWR4 Gm37357-201ENSMUST00000192386 3123 ntBASIC6.98□□□□□ -1.29
Usp40Q8BWR4 Gm8878-201ENSMUST00000173552 1725 ntBASIC6.98□□□□□ -1.29
Usp40Q8BWR4 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC6.98□□□□□ -1.29
Usp40Q8BWR4 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.98□□□□□ -1.29
Usp40Q8BWR4 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 149.1 ms