Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm29573-201ENSMUST00000190291 919 ntBASIC5.8□□□□□ -1.48
Sox9Q04887 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm43431-201ENSMUST00000198577 340 ntBASIC5.8□□□□□ -1.48
Sox9Q04887 Gm43919-201ENSMUST00000204303 364 ntBASIC5.8□□□□□ -1.48
Sox9Q04887 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC5.8□□□□□ -1.48
Sox9Q04887 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC5.8□□□□□ -1.48
Sox9Q04887 AC091783.2-201ENSMUST00000224626 740 ntBASIC5.8□□□□□ -1.48
Sox9Q04887 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC5.8□□□□□ -1.48
Sox9Q04887 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm7808-201ENSMUST00000082002 387 ntBASIC5.8□□□□□ -1.48
Sox9Q04887 Gm24706-201ENSMUST00000082806 137 ntBASIC5.8□□□□□ -1.48
Sox9Q04887 Gm22741-201ENSMUST00000083438 165 ntBASIC5.8□□□□□ -1.48
Sox9Q04887 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sox9Q04887 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.8□□□□□ -1.48
Sox9Q04887 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.8□□□□□ -1.48
Sox9Q04887 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm16270-201ENSMUST00000160327 3238 ntBASIC5.8□□□□□ -1.48
Sox9Q04887 Gm38377-201ENSMUST00000193253 3772 ntBASIC5.8□□□□□ -1.48
Sox9Q04887 Gm14895-201ENSMUST00000121858 1361 ntBASIC5.8□□□□□ -1.48
Sox9Q04887 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Sox9Q04887 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox9Q04887 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.79□□□□□ -1.48
Sox9Q04887 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Sox9Q04887 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox9Q04887 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
Sox9Q04887 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.79□□□□□ -1.48
Sox9Q04887 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Sox9Q04887 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox9Q04887 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC5.79□□□□□ -1.48
Sox9Q04887 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Sox9Q04887 Gm16400-201ENSMUST00000116523 1029 ntBASIC5.79□□□□□ -1.48
Sox9Q04887 Gm23987-201ENSMUST00000117039 129 ntBASIC5.79□□□□□ -1.48
Sox9Q04887 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC5.79□□□□□ -1.48
Sox9Q04887 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC5.79□□□□□ -1.48
Sox9Q04887 Gm14769-201ENSMUST00000118590 432 ntBASIC5.79□□□□□ -1.48
Sox9Q04887 Gm12103-201ENSMUST00000121892 362 ntBASIC5.79□□□□□ -1.48
Sox9Q04887 Gm13214-201ENSMUST00000122137 408 ntBASIC5.79□□□□□ -1.48
Sox9Q04887 Gm23211-201ENSMUST00000122717 308 ntBASIC5.79□□□□□ -1.48
Sox9Q04887 Gm23754-201ENSMUST00000157576 63 ntBASIC5.79□□□□□ -1.48
Sox9Q04887 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Sox9Q04887 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Sox9Q04887 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC5.79□□□□□ -1.48
Sox9Q04887 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC5.79□□□□□ -1.48
Sox9Q04887 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Sox9Q04887 Mir7j-201ENSMUST00000184427 122 ntBASIC5.79□□□□□ -1.48
Sox9Q04887 Gm29259-201ENSMUST00000186396 694 ntBASIC5.79□□□□□ -1.48
Sox9Q04887 Gm28489-201ENSMUST00000186655 316 ntBASIC5.79□□□□□ -1.48
Sox9Q04887 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC5.79□□□□□ -1.48
Sox9Q04887 Gm43367-201ENSMUST00000199986 625 ntBASIC5.79□□□□□ -1.48
Sox9Q04887 Gm44673-201ENSMUST00000205692 996 ntBASIC5.79□□□□□ -1.48
Sox9Q04887 Gm45215-201ENSMUST00000206407 395 ntBASIC5.79□□□□□ -1.48
Sox9Q04887 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.79□□□□□ -1.48
Sox9Q04887 Gm44776-201ENSMUST00000207212 381 ntBASIC5.79□□□□□ -1.48
Sox9Q04887 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC5.79□□□□□ -1.48
Sox9Q04887 Gm7990-201ENSMUST00000212126 593 ntBASIC5.79□□□□□ -1.48
Sox9Q04887 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Sox9Q04887 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC5.79□□□□□ -1.48
Sox9Q04887 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox9Q04887 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC5.79□□□□□ -1.48
Sox9Q04887 Gm31931-201ENSMUST00000219666 222 ntBASIC5.79□□□□□ -1.48
Sox9Q04887 AC140930.4-201ENSMUST00000220750 150 ntBASIC5.79□□□□□ -1.48
Sox9Q04887 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC5.79□□□□□ -1.48
Sox9Q04887 AC154257.2-201ENSMUST00000224166 340 ntBASIC5.79□□□□□ -1.48
Sox9Q04887 AC137871.2-201ENSMUST00000226482 289 ntBASIC5.79□□□□□ -1.48
Sox9Q04887 AC139758.1-201ENSMUST00000226573 930 ntBASIC5.79□□□□□ -1.48
Sox9Q04887 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.79□□□□□ -1.48
Sox9Q04887 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox9Q04887 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox9Q04887 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
Sox9Q04887 Gm7887-201ENSMUST00000056948 537 ntBASIC5.79□□□□□ -1.48
Sox9Q04887 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms