Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 AC125484.1-201ENSMUST00000223218 234 ntBASIC4.5□□□□□ -1.69
Sox3P53784 CT025552.2-201ENSMUST00000225497 317 ntBASIC4.5□□□□□ -1.69
Sox3P53784 CT030194.2-201ENSMUST00000225752 379 ntBASIC4.5□□□□□ -1.69
Sox3P53784 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.5□□□□□ -1.69
Sox3P53784 Gm23623-201ENSMUST00000082461 107 ntBASIC4.5□□□□□ -1.69
Sox3P53784 Gm22155-201ENSMUST00000083836 162 ntBASIC4.5□□□□□ -1.69
Sox3P53784 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Sox3P53784 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Sox3P53784 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Sox3P53784 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Sox3P53784 Gm42955-201ENSMUST00000197355 3393 ntBASIC4.5□□□□□ -1.69
Sox3P53784 Gm42615-201ENSMUST00000197704 1820 ntBASIC4.5□□□□□ -1.69
Sox3P53784 Gm45322-201ENSMUST00000211642 1361 ntBASIC4.5□□□□□ -1.69
Sox3P53784 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Sox3P53784 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.5□□□□□ -1.69
Sox3P53784 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Sox3P53784 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Sox3P53784 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Sox3P53784 Gm37514-201ENSMUST00000194512 2753 ntBASIC4.49□□□□□ -1.69
Sox3P53784 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sox3P53784 Gm43130-201ENSMUST00000197721 3907 ntBASIC4.49□□□□□ -1.69
Sox3P53784 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sox3P53784 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sox3P53784 Gm43281-201ENSMUST00000202522 2704 ntBASIC4.49□□□□□ -1.69
Sox3P53784 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Sox3P53784 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sox3P53784 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sox3P53784 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sox3P53784 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC4.49□□□□□ -1.69
Sox3P53784 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.49□□□□□ -1.69
Sox3P53784 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.49□□□□□ -1.69
Sox3P53784 Gm16420-201ENSMUST00000120258 856 ntBASIC4.49□□□□□ -1.69
Sox3P53784 Gm15390-201ENSMUST00000120323 738 ntBASIC4.49□□□□□ -1.69
Sox3P53784 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC4.49□□□□□ -1.69
Sox3P53784 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC4.49□□□□□ -1.69
Sox3P53784 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sox3P53784 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sox3P53784 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sox3P53784 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC4.49□□□□□ -1.69
Sox3P53784 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sox3P53784 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sox3P53784 Gm25058-201ENSMUST00000157365 128 ntBASIC4.49□□□□□ -1.69
Sox3P53784 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Sox3P53784 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Sox3P53784 Gm27896-201ENSMUST00000175162 317 ntBASIC4.49□□□□□ -1.69
Sox3P53784 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC4.49□□□□□ -1.69
Sox3P53784 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sox3P53784 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC4.49□□□□□ -1.69
Sox3P53784 Gm18802-201ENSMUST00000186270 888 ntBASIC4.49□□□□□ -1.69
Sox3P53784 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sox3P53784 Gm9443-201ENSMUST00000188406 816 ntBASIC4.49□□□□□ -1.69
Sox3P53784 Gm8823-201ENSMUST00000193158 433 ntBASIC4.49□□□□□ -1.69
Sox3P53784 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sox3P53784 Gm42666-201ENSMUST00000201954 152 ntBASIC4.49□□□□□ -1.69
Sox3P53784 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC4.49□□□□□ -1.69
Sox3P53784 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC4.49□□□□□ -1.69
Sox3P53784 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC4.49□□□□□ -1.69
Sox3P53784 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC4.49□□□□□ -1.69
Sox3P53784 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Sox3P53784 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Sox3P53784 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Sox3P53784 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Sox3P53784 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Sox3P53784 Mir129-2-201ENSMUST00000083577 90 ntBASIC4.49□□□□□ -1.69
Sox3P53784 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sox3P53784 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sox3P53784 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Sox3P53784 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
Sox3P53784 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sox3P53784 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
Sox3P53784 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Sox3P53784 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sox3P53784 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sox3P53784 Gm13712-201ENSMUST00000117484 2295 ntBASIC4.48□□□□□ -1.69
Sox3P53784 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Sox3P53784 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Sox3P53784 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC4.48□□□□□ -1.69
Sox3P53784 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Sox3P53784 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.48□□□□□ -1.69
Sox3P53784 AC147639.2-202ENSMUST00000224834 1545 ntBASIC4.48□□□□□ -1.69
Sox3P53784 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Sox3P53784 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.48□□□□□ -1.69
Sox3P53784 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Sox3P53784 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sox3P53784 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Sox3P53784 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Sox3P53784 Gm24403-201ENSMUST00000104616 130 ntBASIC4.48□□□□□ -1.69
Sox3P53784 Gm23178-201ENSMUST00000116782 95 ntBASIC4.48□□□□□ -1.69
Sox3P53784 Klra14-ps-201ENSMUST00000119532 802 ntBASIC4.48□□□□□ -1.69
Sox3P53784 Gm11866-201ENSMUST00000120209 335 ntBASIC4.48□□□□□ -1.69
Sox3P53784 Gm13973-201ENSMUST00000121371 894 ntBASIC4.48□□□□□ -1.69
Sox3P53784 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.48□□□□□ -1.69
Sox3P53784 Gm15796-201ENSMUST00000162135 204 ntBASIC4.48□□□□□ -1.69
Sox3P53784 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Sox3P53784 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Sox3P53784 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sox3P53784 Gm23633-201ENSMUST00000175293 119 ntBASIC4.48□□□□□ -1.69
Sox3P53784 Mir7022-201ENSMUST00000183749 61 ntBASIC4.48□□□□□ -1.69
Sox3P53784 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Sox3P53784 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms