Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Col18a1P39061 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC6.71□□□□□ -1.34
Col18a1P39061 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
Col18a1P39061 Gm19039-201ENSMUST00000204363 575 ntBASIC6.71□□□□□ -1.34
Col18a1P39061 AC137127.3-201ENSMUST00000213340 349 ntBASIC6.71□□□□□ -1.34
Col18a1P39061 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC6.71□□□□□ -1.34
Col18a1P39061 AC154692.1-201ENSMUST00000228314 544 ntBASIC6.71□□□□□ -1.34
Col18a1P39061 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Col18a1P39061 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Col18a1P39061 Gm45415-201ENSMUST00000209644 2074 ntBASIC6.71□□□□□ -1.34
Col18a1P39061 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col18a1P39061 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col18a1P39061 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col18a1P39061 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Col18a1P39061 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col18a1P39061 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col18a1P39061 AC174797.5-201ENSMUST00000225055 1860 ntBASIC6.71□□□□□ -1.34
Col18a1P39061 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col18a1P39061 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col18a1P39061 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col18a1P39061 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col18a1P39061 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Col18a1P39061 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col18a1P39061 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
Col18a1P39061 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Col18a1P39061 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col18a1P39061 Gm22343-201ENSMUST00000122648 286 ntBASIC6.7□□□□□ -1.34
Col18a1P39061 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col18a1P39061 Gm24251-201ENSMUST00000157324 114 ntBASIC6.7□□□□□ -1.34
Col18a1P39061 Gm22945-201ENSMUST00000158557 157 ntBASIC6.7□□□□□ -1.34
Col18a1P39061 Gm20549-201ENSMUST00000174804 429 ntBASIC6.7□□□□□ -1.34
Col18a1P39061 Gm28186-201ENSMUST00000187447 679 ntBASIC6.7□□□□□ -1.34
Col18a1P39061 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC6.7□□□□□ -1.34
Col18a1P39061 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC6.7□□□□□ -1.34
Col18a1P39061 Gm18997-201ENSMUST00000216353 822 ntBASIC6.7□□□□□ -1.34
Col18a1P39061 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC6.7□□□□□ -1.34
Col18a1P39061 Gm32526-201ENSMUST00000221878 981 ntBASIC6.7□□□□□ -1.34
Col18a1P39061 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC6.7□□□□□ -1.34
Col18a1P39061 AC117202.3-201ENSMUST00000228532 310 ntBASIC6.7□□□□□ -1.34
Col18a1P39061 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Col18a1P39061 Gm37248-201ENSMUST00000193576 3174 ntBASIC6.7□□□□□ -1.34
Col18a1P39061 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col18a1P39061 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col18a1P39061 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col18a1P39061 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Col18a1P39061 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
Col18a1P39061 Gm37077-201ENSMUST00000195723 3691 ntBASIC6.7□□□□□ -1.34
Col18a1P39061 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC6.7□□□□□ -1.34
Col18a1P39061 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC6.7□□□□□ -1.34
Col18a1P39061 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col18a1P39061 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Col18a1P39061 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC6.7□□□□□ -1.34
Col18a1P39061 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col18a1P39061 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col18a1P39061 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col18a1P39061 Gm12186-201ENSMUST00000119050 945 ntBASIC6.69□□□□□ -1.34
Col18a1P39061 Gm15799-201ENSMUST00000120899 289 ntBASIC6.69□□□□□ -1.34
Col18a1P39061 Llph-ps1-201ENSMUST00000121281 390 ntBASIC6.69□□□□□ -1.34
Col18a1P39061 Gm12924-201ENSMUST00000121747 318 ntBASIC6.69□□□□□ -1.34
Col18a1P39061 Llph-ps2-201ENSMUST00000122000 393 ntBASIC6.69□□□□□ -1.34
Col18a1P39061 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC6.69□□□□□ -1.34
Col18a1P39061 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col18a1P39061 Gm23617-201ENSMUST00000175410 95 ntBASIC6.69□□□□□ -1.34
Col18a1P39061 Mir7658-201ENSMUST00000184043 57 ntBASIC6.69□□□□□ -1.34
Col18a1P39061 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC6.69□□□□□ -1.34
Col18a1P39061 Gm29479-201ENSMUST00000190352 455 ntBASIC6.69□□□□□ -1.34
Col18a1P39061 Gm44402-201ENSMUST00000203677 238 ntBASIC6.69□□□□□ -1.34
Col18a1P39061 Gm7948-201ENSMUST00000212607 844 ntBASIC6.69□□□□□ -1.34
Col18a1P39061 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC6.69□□□□□ -1.34
Col18a1P39061 AC129935.1-201ENSMUST00000226302 873 ntBASIC6.69□□□□□ -1.34
Col18a1P39061 AC137950.3-201ENSMUST00000228250 246 ntBASIC6.69□□□□□ -1.34
Col18a1P39061 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col18a1P39061 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Col18a1P39061 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col18a1P39061 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col18a1P39061 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Col18a1P39061 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC6.69□□□□□ -1.34
Col18a1P39061 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Col18a1P39061 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Col18a1P39061 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col18a1P39061 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col18a1P39061 Gm37268-201ENSMUST00000192254 2614 ntBASIC6.69□□□□□ -1.34
Col18a1P39061 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.69□□□□□ -1.34
Col18a1P39061 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC6.69□□□□□ -1.34
Col18a1P39061 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col18a1P39061 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col18a1P39061 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col18a1P39061 Gm44171-201ENSMUST00000203701 2109 ntBASIC6.69□□□□□ -1.34
Col18a1P39061 Gm13250-201ENSMUST00000117209 753 ntBASIC6.69□□□□□ -1.34
Col18a1P39061 Defa-ps15-201ENSMUST00000118178 477 ntBASIC6.69□□□□□ -1.34
Col18a1P39061 Gm13867-201ENSMUST00000120844 395 ntBASIC6.69□□□□□ -1.34
Col18a1P39061 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC6.69□□□□□ -1.34
Col18a1P39061 Gm23905-201ENSMUST00000157568 109 ntBASIC6.69□□□□□ -1.34
Col18a1P39061 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC6.69□□□□□ -1.34
Col18a1P39061 Gm27781-201ENSMUST00000185185 92 ntBASIC6.69□□□□□ -1.34
Col18a1P39061 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col18a1P39061 Gm38213-201ENSMUST00000193203 173 ntBASIC6.69□□□□□ -1.34
Col18a1P39061 Gm44404-201ENSMUST00000203979 636 ntBASIC6.69□□□□□ -1.34
Col18a1P39061 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC6.69□□□□□ -1.34
Col18a1P39061 Gm45081-201ENSMUST00000206281 572 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms