Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC5.03□□□□□ -1.6
Col2a1P28481 Gm7093-201ENSMUST00000223004 581 ntBASIC5.03□□□□□ -1.6
Col2a1P28481 AC131747.1-201ENSMUST00000226159 793 ntBASIC5.03□□□□□ -1.6
Col2a1P28481 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Col2a1P28481 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Col2a1P28481 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Col2a1P28481 Gm10705-201ENSMUST00000098980 461 ntBASIC5.03□□□□□ -1.6
Col2a1P28481 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col2a1P28481 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col2a1P28481 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col2a1P28481 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col2a1P28481 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col2a1P28481 AC174797.3-203ENSMUST00000225749 2078 ntBASIC5.03□□□□□ -1.6
Col2a1P28481 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
Col2a1P28481 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.03□□□□□ -1.6
Col2a1P28481 Gm45804-201ENSMUST00000212137 3435 ntBASIC5.03□□□□□ -1.6
Col2a1P28481 Gm3972-201ENSMUST00000173960 2861 ntBASIC5.03□□□□□ -1.6
Col2a1P28481 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Col2a1P28481 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col2a1P28481 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Col2a1P28481 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col2a1P28481 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Col2a1P28481 Gm32444-201ENSMUST00000195147 3511 ntBASIC5.02□□□□□ -1.61
Col2a1P28481 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col2a1P28481 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Col2a1P28481 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Col2a1P28481 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Col2a1P28481 Gm24403-201ENSMUST00000104616 130 ntBASIC5.02□□□□□ -1.61
Col2a1P28481 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC5.02□□□□□ -1.61
Col2a1P28481 Gm13214-201ENSMUST00000122137 408 ntBASIC5.02□□□□□ -1.61
Col2a1P28481 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Col2a1P28481 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Col2a1P28481 Gm22383-201ENSMUST00000158188 327 ntBASIC5.02□□□□□ -1.61
Col2a1P28481 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Col2a1P28481 Gm18350-201ENSMUST00000187395 955 ntBASIC5.02□□□□□ -1.61
Col2a1P28481 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC5.02□□□□□ -1.61
Col2a1P28481 Gm18320-201ENSMUST00000211304 595 ntBASIC5.02□□□□□ -1.61
Col2a1P28481 AC154241.1-201ENSMUST00000223952 356 ntBASIC5.02□□□□□ -1.61
Col2a1P28481 AC154738.5-201ENSMUST00000227397 310 ntBASIC5.02□□□□□ -1.61
Col2a1P28481 AC122035.2-201ENSMUST00000228698 462 ntBASIC5.02□□□□□ -1.61
Col2a1P28481 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Col2a1P28481 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Col2a1P28481 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Col2a1P28481 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col2a1P28481 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
Col2a1P28481 Gm38105-201ENSMUST00000192112 2621 ntBASIC5.02□□□□□ -1.61
Col2a1P28481 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Col2a1P28481 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col2a1P28481 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col2a1P28481 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col2a1P28481 Gm12638-201ENSMUST00000119531 298 ntBASIC5.01□□□□□ -1.61
Col2a1P28481 Gm12755-201ENSMUST00000122297 282 ntBASIC5.01□□□□□ -1.61
Col2a1P28481 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC5.01□□□□□ -1.61
Col2a1P28481 Gm25713-201ENSMUST00000158625 109 ntBASIC5.01□□□□□ -1.61
Col2a1P28481 Gm17916-202ENSMUST00000187634 1187 ntBASIC5.01□□□□□ -1.61
Col2a1P28481 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col2a1P28481 Gm44032-201ENSMUST00000204841 166 ntBASIC5.01□□□□□ -1.61
Col2a1P28481 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col2a1P28481 AC158807.1-201ENSMUST00000217959 187 ntBASIC5.01□□□□□ -1.61
Col2a1P28481 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC5.01□□□□□ -1.61
Col2a1P28481 AC139750.2-201ENSMUST00000224424 386 ntBASIC5.01□□□□□ -1.61
Col2a1P28481 AC133189.2-201ENSMUST00000228527 392 ntBASIC5.01□□□□□ -1.61
Col2a1P28481 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col2a1P28481 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col2a1P28481 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col2a1P28481 Gm45235-201ENSMUST00000208016 4465 ntBASIC5.01□□□□□ -1.61
Col2a1P28481 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col2a1P28481 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col2a1P28481 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col2a1P28481 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col2a1P28481 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col2a1P28481 AC129085.3-201ENSMUST00000225686 1705 ntBASIC5.01□□□□□ -1.61
Col2a1P28481 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col2a1P28481 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col2a1P28481 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col2a1P28481 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col2a1P28481 Gm12103-201ENSMUST00000121892 362 ntBASIC5□□□□□ -1.61
Col2a1P28481 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC5□□□□□ -1.61
Col2a1P28481 Mir5710-201ENSMUST00000176884 69 ntBASIC5□□□□□ -1.61
Col2a1P28481 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC5□□□□□ -1.61
Col2a1P28481 Gm18303-201ENSMUST00000190055 1176 ntBASIC5□□□□□ -1.61
Col2a1P28481 Gm9245-201ENSMUST00000200528 983 ntBASIC5□□□□□ -1.61
Col2a1P28481 Gm17780-201ENSMUST00000207142 612 ntBASIC5□□□□□ -1.61
Col2a1P28481 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC5□□□□□ -1.61
Col2a1P28481 AC122448.1-201ENSMUST00000226317 772 ntBASIC5□□□□□ -1.61
Col2a1P28481 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col2a1P28481 Gm25592-201ENSMUST00000082635 131 ntBASIC5□□□□□ -1.61
Col2a1P28481 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col2a1P28481 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col2a1P28481 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col2a1P28481 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Col2a1P28481 Gm42910-201ENSMUST00000198917 2921 ntBASIC5□□□□□ -1.61
Col2a1P28481 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col2a1P28481 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC5□□□□□ -1.61
Col2a1P28481 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
Col2a1P28481 Gm43594-201ENSMUST00000201153 3442 ntBASIC5□□□□□ -1.61
Col2a1P28481 Gm37268-201ENSMUST00000192254 2614 ntBASIC5□□□□□ -1.61
Col2a1P28481 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Col2a1P28481 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col2a1P28481 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms