Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Hoxd3P09027 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Hoxd3P09027 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Hoxd3P09027 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Hoxd3P09027 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Hoxd3P09027 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC5.32□□□□□ -1.56
Hoxd3P09027 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Hoxd3P09027 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Hoxd3P09027 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC5.32□□□□□ -1.56
Hoxd3P09027 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Hoxd3P09027 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Hoxd3P09027 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm37138-201ENSMUST00000194564 2089 ntBASIC5.32□□□□□ -1.56
Hoxd3P09027 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Hoxd3P09027 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm12021-201ENSMUST00000121061 1746 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm37310-201ENSMUST00000195237 2968 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Hoxd3P09027 AC158988.1-201ENSMUST00000226731 2624 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Hoxd3P09027 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Hoxd3P09027 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm42994-201ENSMUST00000195964 2549 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Hoxd3P09027 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm45073-201ENSMUST00000207688 4247 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm37056-201ENSMUST00000192141 1865 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm5757-201ENSMUST00000117494 528 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm14893-201ENSMUST00000117904 282 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm13006-201ENSMUST00000118683 214 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm12565-201ENSMUST00000119004 649 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm12137-201ENSMUST00000119565 346 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm4886-201ENSMUST00000121874 1176 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm12175-201ENSMUST00000122081 345 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm25395-201ENSMUST00000157343 272 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm22538-201ENSMUST00000158169 299 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Hoxd3P09027 Mir3066-201ENSMUST00000175296 83 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC5.31□□□□□ -1.56
Hoxd3P09027 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm37265-201ENSMUST00000191698 885 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm7019-201ENSMUST00000194122 369 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm9722-201ENSMUST00000194568 802 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm3010-201ENSMUST00000198805 448 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm43849-201ENSMUST00000201086 215 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm43968-201ENSMUST00000203388 389 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm19900-201ENSMUST00000207285 576 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm2774-201ENSMUST00000213650 1165 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm7540-201ENSMUST00000219764 926 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.31□□□□□ -1.56
Hoxd3P09027 AC154558.1-201ENSMUST00000222278 415 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Hoxd3P09027 AC126275.2-201ENSMUST00000225224 253 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Hoxd3P09027 AW822073-201ENSMUST00000075305 555 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 n-R5s95-201ENSMUST00000082684 118 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Hoxd3P09027 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Hoxd3P09027 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Hoxd3P09027 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Hoxd3P09027 AC117608.1-201ENSMUST00000225500 3418 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC5.31□□□□□ -1.56
Hoxd3P09027 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Hoxd3P09027 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Hoxd3P09027 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Hoxd3P09027 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Hoxd3P09027 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm44676-201ENSMUST00000208520 3055 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm44185-201ENSMUST00000204539 3307 ntBASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC5.31□□□□□ -1.56
Hoxd3P09027 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Hoxd3P09027 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
Hoxd3P09027 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Hoxd3P09027 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Hoxd3P09027 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Hoxd3P09027 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hoxd3P09027 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hoxd3P09027 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Hoxd3P09027 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Hoxd3P09027 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.3□□□□□ -1.56
Hoxd3P09027 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC5.3□□□□□ -1.56
Hoxd3P09027 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Hoxd3P09027 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hoxd3P09027 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 110.2 ms