Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm18620-201ENSMUST00000222295 324 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 AC159263.3-201ENSMUST00000223434 460 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 AC168059.1-201ENSMUST00000225846 841 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 AC137902.1-201ENSMUST00000228184 102 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm16415-201ENSMUST00000080097 489 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 AC144733.2-201ENSMUST00000222552 2292 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 AC102431.1-201ENSMUST00000223773 1449 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm37092-201ENSMUST00000193381 1518 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.28□□□□□ -1.56
Pcdh1F7BJK1 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Gm3940-201ENSMUST00000105087 432 ntBASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Gm12653-201ENSMUST00000117778 561 ntBASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Gm8475-201ENSMUST00000118211 526 ntBASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Gm11447-201ENSMUST00000118983 858 ntBASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Mir1953-201ENSMUST00000157866 89 ntBASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Gm3141-201ENSMUST00000168726 499 ntBASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Gm20543-201ENSMUST00000174200 726 ntBASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Mirt2-201ENSMUST00000175179 285 ntBASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Gm8221-201ENSMUST00000178052 564 ntBASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Mir496b-201ENSMUST00000184935 113 ntBASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Gm29124-201ENSMUST00000186576 452 ntBASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Gm28700-201ENSMUST00000187614 579 ntBASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Gm37837-201ENSMUST00000191743 604 ntBASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Gm38237-201ENSMUST00000193366 376 ntBASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Trav3n-2-201ENSMUST00000197693 334 ntBASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Gm43054-201ENSMUST00000199495 884 ntBASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Trav3d-2-201ENSMUST00000199874 334 ntBASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Gm44048-201ENSMUST00000204531 361 ntBASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Gm45448-201ENSMUST00000211739 209 ntBASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 AC131677.1-201ENSMUST00000218721 535 ntBASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Gm17165-201ENSMUST00000096155 493 ntBASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Pcdh1F7BJK1 Gm44209-201ENSMUST00000204556 4153 ntBASIC5.26□□□□□ -1.57
Pcdh1F7BJK1 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms