Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.5□□□□□ -0.25
PdfS4R2K0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdfS4R2K0 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
PdfS4R2K0 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdfS4R2K0 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdfS4R2K0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdfS4R2K0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdfS4R2K0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdfS4R2K0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PdfS4R2K0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
PdfS4R2K0 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PdfS4R2K0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PdfS4R2K0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PdfS4R2K0 Gm10129-202ENSMUST00000193100 1316 ntBASIC13.49□□□□□ -0.25
PdfS4R2K0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PdfS4R2K0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PdfS4R2K0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PdfS4R2K0 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.49□□□□□ -0.25
PdfS4R2K0 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.49□□□□□ -0.25
PdfS4R2K0 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.49□□□□□ -0.25
PdfS4R2K0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PdfS4R2K0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PdfS4R2K0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PdfS4R2K0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PdfS4R2K0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PdfS4R2K0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PdfS4R2K0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PdfS4R2K0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PdfS4R2K0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PdfS4R2K0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PdfS4R2K0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PdfS4R2K0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PdfS4R2K0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PdfS4R2K0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PdfS4R2K0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PdfS4R2K0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PdfS4R2K0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PdfS4R2K0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PdfS4R2K0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PdfS4R2K0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.48□□□□□ -0.25
PdfS4R2K0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC13.48□□□□□ -0.25
PdfS4R2K0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PdfS4R2K0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.48□□□□□ -0.25
PdfS4R2K0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC13.48□□□□□ -0.25
PdfS4R2K0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PdfS4R2K0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PdfS4R2K0 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PdfS4R2K0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PdfS4R2K0 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PdfS4R2K0 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PdfS4R2K0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PdfS4R2K0 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PdfS4R2K0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
PdfS4R2K0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PdfS4R2K0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PdfS4R2K0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
PdfS4R2K0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC13.47□□□□□ -0.25
PdfS4R2K0 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
PdfS4R2K0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PdfS4R2K0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PdfS4R2K0 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
PdfS4R2K0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PdfS4R2K0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PdfS4R2K0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
PdfS4R2K0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PdfS4R2K0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
PdfS4R2K0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC13.47□□□□□ -0.25
PdfS4R2K0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC13.47□□□□□ -0.25
PdfS4R2K0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PdfS4R2K0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PdfS4R2K0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PdfS4R2K0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PdfS4R2K0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PdfS4R2K0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PdfS4R2K0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PdfS4R2K0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PdfS4R2K0 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.47□□□□□ -0.25
PdfS4R2K0 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
PdfS4R2K0 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PdfS4R2K0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PdfS4R2K0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC13.46□□□□□ -0.25
PdfS4R2K0 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
PdfS4R2K0 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
PdfS4R2K0 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PdfS4R2K0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PdfS4R2K0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PdfS4R2K0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
PdfS4R2K0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PdfS4R2K0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PdfS4R2K0 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.46□□□□□ -0.25
PdfS4R2K0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.46□□□□□ -0.25
PdfS4R2K0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
PdfS4R2K0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC13.46□□□□□ -0.25
PdfS4R2K0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PdfS4R2K0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PdfS4R2K0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
PdfS4R2K0 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PdfS4R2K0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
PdfS4R2K0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
PdfS4R2K0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms